Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01688 ATGGGGTTTTCAGTGCTACTACTTTTGTTTCCTCTTGTGGTTTTGCTCTCAAACCCAACATGGGTGTGTGGGAATGGAGAGCTAAGAGCACTGATGGACATGAAAGCCAGTTTGGACCCAGAGAGCCTTTATCTACCCTCTTGGACTATCAATGGTGACCCATGTGATGGATCTTTTGAGGGAGTAGCATGCACTGAGAAGGGTCAGGTGGCAAATATTTCTTTGCAGGGAAAGGGCCTCTTAGGGAAGCTTTCACCTGCCATTGCTGGCCTCAAGCACTTGACCGGACTCTACTTGCATTATAACTCTTTGTATGGAGAGATACCAAGAGAGATTGCAAACTTGACTGAGCTTGTTGATTTGTATTTGAATGTAAATGATCTGTCCGGGGAAATCCCCCGTGAAATCGCCAGCATGGAGAACTTGCAAGTTTTGCAGCTTTGTTATAATCAGTTGACAGGAAGCATTCCTACACAGCTCGGTGCTTTGGAAAAGCTGAGAGTTGTTGCTTTGCAGTCAAACAATTTAACTGGTGCCATCCCTGCTAGTCTAGGTGATTTGGGTATGCTGGTGAGGCTAGATTTGAGCTCTAATAATTTCTTTGGTTCCATTCCCACTAGCCTAGCTGATGCTCCTTCACTGAAAGTTTTGGACGTTCACAACAATACCCTTTCTGGGAATGTACCACCTGCTCTTAAGAGACTAGATGATGGATTTCTGTATGAAAACAATCTGGGGTTATGTGGAGTTGGGTTTTCATCCCTGAAAGCTTGCAACGCTTCGGATCATGTCAATCCTAGCAGACCTGAACCTTATGGAGCAGCCACAAGAGATATCCCTGAAACTGCAAATGTGAAGTTACCTTGCAGTGGAACTCAGTGCCTTAATTCATCAAAATCTAATCAATCCACATCAATTACTGTTGGCATATTTGTGGTTATAATTGCACTGTCTGCAATTGGTATTTTGACATTCACATTATATCGTAGGAGAAAACAAAAGCTTGGTGATTCTTTCCATATCAGTGGCAGTCATCTAAGTACTGATGAAGCCATTGGTGCATATAGGAAAAATGGATCTCCTCTGGTAAGCCTTGAGTACTCTACCGGATGGGACCCTTTGGCTGATAGTAGAAATTTCAATGGGTATAGCCAAGATATGTTCCAGAGTTTGAGGTTCAACTTGGATGAAGTGGAGTCAGCTACTCAGTATTTCTCAGAGTTAAATCTGTTGGGTAAGAATAGCTTTAGTGCAACATATAGAGGAGTTTTGAGAGATGGATCCGTTGTTGCTGTGAAGAGCATCAGTAAAACTAGTTGCAAGTCAGATGAAGGTGAGTTTATGAAGGGATTGAACATGTTGACCTCACTGAGGAATGATAATGTAGTGAGGTTGAGAGGATTTTGTTGTTCAAGGGGACGAGGTGAATGCTTTCTGATTTATGATTTTGTTCCTAATGGAAACCTTTCACGCTTCCTTGATGTTAAGGAAGGAGATGGAGAAGTCCTTGAATGGTCAACTAGAGTTTCTATTGTGAAAGGGATTGCTAAAGGTATGGCATATTTACATGCATACAAAGCAAACAAACCCGTTTTGGTTCACCAAAACATCTCAGCTGACAAAGTTCTCATTGATCAGCGGTACAATCCATTGTTAGCAGATTCTGGCTTGTACAAACTTCTTACTAATGATATTGTCTTCTCTGCACTCAAGGGTAGTGCAGCTAAGGGTTACTTGGCTCCTGAATATGCCACTACTGGCCGGTTTGCTGAGACAAGTGATGTTTATGCTTTTGGGGTGTTGCTTTTCCAAATCCTTTCAGGGAAGCAAGAGATCAATAGCTCAATAAGGCTTGCTGCAGAGTCCTCCAAATTCCAAGAATTTATGGACCCAAATCTCCATGGAAGATACTTTGAATATGAAGCAGCTAAGCTGGCAAAAATAGCTTTGCTTTGCTCCCATGAGTCTCCTTTTGAGAGGCCATCCATGGAAGCCATTATTCAAGAACTAGGGAATTGTAGTAGCTGTCTCTGA 2034 0.4238 MGFSVLLLLFPLVVLLSNPTWVCGNGELRALMDMKASLDPESLYLPSWTINGDPCDGSFEGVACTEKGQVANISLQGKGLLGKLSPAIAGLKHLTGLYLHYNSLYGEIPREIANLTELVDLYLNVNDLSGEIPREIASMENLQVLQLCYNQLTGSIPTQLGALEKLRVVALQSNNLTGAIPASLGDLGMLVRLDLSSNNFFGSIPTSLADAPSLKVLDVHNNTLSGNVPPALKRLDDGFLYENNLGLCGVGFSSLKACNASDHVNPSRPEPYGAATRDIPETANVKLPCSGTQCLNSSKSNQSTSITVGIFVVIIALSAIGILTFTLYRRRKQKLGDSFHISGSHLSTDEAIGAYRKNGSPLVSLEYSTGWDPLADSRNFNGYSQDMFQSLRFNLDEVESATQYFSELNLLGKNSFSATYRGVLRDGSVVAVKSISKTSCKSDEGEFMKGLNMLTSLRNDNVVRLRGFCCSRGRGECFLIYDFVPNGNLSRFLDVKEGDGEVLEWSTRVSIVKGIAKGMAYLHAYKANKPVLVHQNISADKVLIDQRYNPLLADSGLYKLLTNDIVFSALKGSAAKGYLAPEYATTGRFAETSDVYAFGVLLFQILSGKQEINSSIRLAAESSKFQEFMDPNLHGRYFEYEAAKLAKIALLCSHESPFERPSMEAIIQELGNCSSCL 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01688 677 FunFam Protein NSP-INTERACTING KINASE 2 376 483 - -
Pumo3g01688 677 ProSiteProfiles Protein kinase domain profile. 405 677 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g01688 677 Pfam Protein tyrosine and serine/threonine kinase 409 670 IPR001245 GO:0004672|GO:0006468
Pumo3g01688 677 FunFam Protein NSP-INTERACTING KINASE 2 21 273 - -
Pumo3g01688 677 Gene3D Phosphorylase Kinase; domain 1 375 483 - -
Pumo3g01688 677 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 82 670 - -
Pumo3g01688 677 Gene3D Transferase(Phosphotransferase) domain 1 484 676 - -
Pumo3g01688 677 Pfam Leucine rich repeat N-terminal domain 26 64 IPR013210 -
Pumo3g01688 677 SUPERFAMILY Protein kinase-like (PK-like) 380 670 IPR011009 -
Pumo3g01688 677 Pfam Leucine rich repeat 141 200 IPR001611 GO:0005515
Pumo3g01688 677 FunFam Protein NSP-INTERACTING KINASE 2 484 674 - -
Pumo3g01688 677 SUPERFAMILY L domain-like 23 233 - -
Pumo3g01688 677 Gene3D Ribonuclease Inhibitor 21 282 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01688 Pumo-Chr3 26000028 26003394 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01688 8 518 Miscellaneous Gene Families AT4G22730 56.000 0.0 573
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Pumo3g01688 PK_Tyr_Ser-Thr 8.6e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01688 - - gmx:100775422 1273.84