Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01670 ATGGAACCGACATTGCAGCAACCACCACCGCAACCGCCGCCGCGCACCGCCACCATCCTCGGGAAGTACCAGCTGACGCGCTTCCTCGGCCGTGGCAGCTTCGCGAAGGTTTACCAAGCGCGATCCCTCATCGACGGCGCGGCCGTCGCCGTGAAAGTAATCGACAAATTGAAAACCGTGGACGCCGGCATGGAGCCCCGCATAATCCGCGAGATCGACGCCATGCGCCGCCTCCACCACCACCCTAACATCCTCAAAATCCACGAGGTGCTGGCCACGAAGACCAAGATCCACCTGATTGTGGAGCTCGCCGGCGGCGGCGAGCTCTTCGCCAAAATCTCCCGCCGAGGAAAGTTACCGGAGTCCACGGCGCGCCGCTACTTCCAGCAACTCGTCTCGGCGCTCCGGTTCTGCCACCGCAACGGCGTGGCGCACCGCGACTTGAAGCCGCAGAACCTCCTCCTCGACGGCGACGGCAACCTCAAGGTCTCCGACTTCGGGCTCTCCGCGCTGCCGGAGCAGCTCAAGAACGGCCTCCTCCACACCGCGTGCGGCACGCCGGCGTACACCGCGCCGGAGATCCTCCGCCGGAGCGGCGGCTACGACGGGTCCAAGGCCGACGCGTGGTCCTGCGGCCTCATCCTCTTCGTCTTCCTCGCCGGATACCTCCCGTTCGACGACACCAACATTCCAGCCATGTGCAAGAAGATTTCCCGGCGAGATTACCAGTTCCCGGAGTGGATTTCAAAACCGGCCCGTTTTGTTATCCACAAATTACTGGACCCGAACCCGGAAACCCGAATGGGCCTGGAGGCCCTGTTCGGAAACGCGTGGTTTAAGAAATCATTAAAACCGGAAACGGCGGAAGAAAATGCGTTCGGGTTGGGGTTGGGGTGGGATAATGTTTTTGGGAAGAGTAGTTATTATTACGAAGGGAGTAAGAGTTCGGGTGTGACCGCGTTTGATATAATATCGATGTCTTCGGGTTTGGATTTAACGAGGTTGTTCGAAACGACGTCGGATTTGGGGAGTAGGAGGGAGAAGAGGTTCACTTCAAGTGCGAAGGTGGAAGTGGTGGAAGAGAAGGTTAAGGAAGTGGGTGGGGTATTGGGGTTTAGGGTTGAGGTTGGGAAGAGTAACGGTGCAATTGCGTTTGTGAAAGGGAAAGTGGCTTTGGTGTTTGAGGTGCTTGAGATTGTGCCCGATGAACTTCTTCTGGTGGCTGTTAAGGTGGTGGAGGGTGTGTTGGAGTTTGAGGAACATCATTGGGGGGATTGGAAAGATGCGTTGCAGGATCTCGTGCTCTCTTGGCACAACGAAGAATCTTCATGA 1332 0.5766 MEPTLQQPPPQPPPRTATILGKYQLTRFLGRGSFAKVYQARSLIDGAAVAVKVIDKLKTVDAGMEPRIIREIDAMRRLHHHPNILKIHEVLATKTKIHLIVELAGGGELFAKISRRGKLPESTARRYFQQLVSALRFCHRNGVAHRDLKPQNLLLDGDGNLKVSDFGLSALPEQLKNGLLHTACGTPAYTAPEILRRSGGYDGSKADAWSCGLILFVFLAGYLPFDDTNIPAMCKKISRRDYQFPEWISKPARFVIHKLLDPNPETRMGLEALFGNAWFKKSLKPETAEENAFGLGLGWDNVFGKSSYYYEGSKSSGVTAFDIISMSSGLDLTRLFETTSDLGSRREKRFTSSAKVEVVEEKVKEVGGVLGFRVEVGKSNGAIAFVKGKVALVFEVLEIVPDELLLVAVKVVEGVLEFEEHHWGDWKDALQDLVLSWHNEESS 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01670 443 Gene3D Kinase associated domain 1, KA1 315 435 - -
Pumo3g01670 443 SUPERFAMILY Protein kinase-like (PK-like) 19 286 IPR011009 -
Pumo3g01670 443 Gene3D Transferase(Phosphotransferase) domain 1 14 296 - -
Pumo3g01670 443 SMART serkin_6 23 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g01670 443 FunFam Non-specific serine/threonine protein kinase 16 108 - -
Pumo3g01670 443 Pfam Protein kinase domain 23 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g01670 443 Pfam NAF domain 319 375 IPR004041 GO:0007165
Pumo3g01670 443 ProSitePatterns Protein kinases ATP-binding region signature. 29 52 IPR017441 GO:0005524
Pumo3g01670 443 ProSiteProfiles Protein kinase domain profile. 23 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g01670 443 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 18 385 - -
Pumo3g01670 443 ProSitePatterns Serine/Threonine protein kinases active-site signature. 143 155 IPR008271 GO:0004672|GO:0006468
Pumo3g01670 443 ProSiteProfiles NAF domain profile. 313 337 IPR018451 GO:0007165
Pumo3g01670 443 CDD CIPK_C 319 431 - -
Pumo3g01670 443 FunFam Non-specific serine/threonine protein kinase 14 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01670 Pumo-Chr3 25728778 25730972 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01670 5 439 CBL-interacting serine-threonine protein kinases AT4G14580 58.182 4.55e-169 480
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Pumo3g01670 Pkinase 6.7e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01670 K12761 - gmx:100784173 790.03