Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01657 ATGAATATAATATTAACCATTTTGATCCTTATTTTCAGGTGGTCAGCAATTGCAGCCAAATTGCCAGGAAGAACTGACAACGAGATAAAAAATGTGTGGCACACCAATTTGAAGAAGAGGCTGCTGAAATCAGACCAGTCCAATCCAAATTCCAAAAGAGCCACTAAGCCAAGAATTAAACGTTCTGATTCCAATTCCAGCATCATAACTCAATCAGAACCTGCCAATCTTAATTTCAGAGAAATGGACACAACATCAGCATGCACTAGTTCTAGTGATTTTTCATCAGTCACGGTTGGTGATAGCAAAAATATCAAGTGTGAAGACATAGAGTCTCTGGAGACAATGCCTGTGATTGACGAGAGCTTTTGGTCAGAAGCTGCAATTGATGAAACCCCCACCATGTCATCACAATCTTTGACAATCTCAAATGAGATGCCACTTCAATACCCTTTTGCTAACTATGAGGAAAGTTTCCAACAGAGTCATGCTTATGATTCAAACTTTGATGATGGCATGGATTTCTGGTATGACATATTCACCAGGACCGCGGGTTCAATTGAATTGCCAGAGTTCTGA 579 0.399 MNIILTILILIFRWSAIAAKLPGRTDNEIKNVWHTNLKKRLLKSDQSNPNSKRATKPRIKRSDSNSSIITQSEPANLNFREMDTTSACTSSSDFSSVTVGDSKNIKCEDIESLETMPVIDESFWSEAAIDETPTMSSQSLTISNEMPLQYPFANYEESFQQSHAYDSNFDDGMDFWYDIFTRTAGSIELPEF 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01657 192 MobiDBLite consensus disorder prediction 43 74 - -
Pumo3g01657 192 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 13 134 - -
Pumo3g01657 192 SUPERFAMILY Homeodomain-like 12 45 IPR009057 -
Pumo3g01657 192 CDD SANT 13 37 IPR001005 -
Pumo3g01657 192 Gene3D - 6 73 - -
Pumo3g01657 192 ProSiteProfiles Myb-like domain profile. 13 37 IPR001005 -
Pumo3g01657 192 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 13 41 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01657 Pumo-Chr3 25498016 25500399 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01657 3 189 MYB Transcription Factor Family AT3G23250 38.208 7.16e-27 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pumo3g01657 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01657 K09422 - gmx:100807569 307.76