Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01639 ATGGGATTCTATCTTAATCTCAAAATCAAGGCATTCCGGCTGAAACGGTTTCTGCTAGGACATGGAGGCAGAAAAAGAAAGCACAAGCAGGCAAATAAGCCCTCATGGATGATGCCAATGACATATGGTTATCATGTGGTGGAGCATAATATGAGAAGAGATGGTTCTGATAACTCAGACTTTGATTCAGTTGTGGCACAGAGAGAGCAAATGGATCACACAGAATTGTGGTATTTTGGAATCTTTGACGCACTAATTGGAGACAAGATTACCAAATACATGCAGTCTCATTTCTTTGACAAGAAGCTTCAAGAGACTCATATAAGGAGAAAAAGCAAGGAAGCTCTGAAGAGAGCTTACCTTGGTGTAAGAGCTAAGATCAGAGAGGAACACAAATTCGAGGAGACATGCAAAATGGGTTCAGCATCTGTTATGTTGATCAATGGAGAAAAACTTGTAGTTGCCAACATGGGAGATTACAGAACCGTTGTGTGCAGAGATGGCATAGCTCATCAGACAACTGGCAGATACCAACAATCAGCGAAAATACATTGGTCTCGCAGACTCTTTGCAGGACCCATGCTAGCATGTCAATCAGGAGATGCAGCAGGTGCAAAGCATTCCAGAGGCTCTGATTTTGTCGTTAGAAGTGAAAGGATCGATTCTGATACTGAGTTTTTGATATTAGCAAGCAATGGCATATGGGAGGTGATGAAAAACCAAGAGGCTGTGAATCTGATCAGTCACATAGAGGATCCACAAGAAGCAGCTGAATGCTTGGCAAAGGAAGCTTTAATTAGGATGTGCAAAAGCAGCATCTCATGCTTAATCATTCGCTTTGACTGA 846 0.4208 MGFYLNLKIKAFRLKRFLLGHGGRKRKHKQANKPSWMMPMTYGYHVVEHNMRRDGSDNSDFDSVVAQREQMDHTELWYFGIFDALIGDKITKYMQSHFFDKKLQETHIRRKSKEALKRAYLGVRAKIREEHKFEETCKMGSASVMLINGEKLVVANMGDYRTVVCRDGIAHQTTGRYQQSAKIHWSRRLFAGPMLACQSGDAAGAKHSRGSDFVVRSERIDSDTEFLILASNGIWEVMKNQEAVNLISHIEDPQEAAECLAKEALIRMCKSSISCLIIRFD 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01639 281 SUPERFAMILY PP2C-like 38 281 IPR036457 -
Pumo3g01639 281 Pfam Protein phosphatase 2C 65 173 IPR001932 -
Pumo3g01639 281 Pfam Protein phosphatase 2C 217 271 IPR001932 -
Pumo3g01639 281 CDD PP2Cc 62 280 IPR001932 -
Pumo3g01639 281 ProSiteProfiles PPM-type phosphatase domain profile. 58 280 IPR001932 -
Pumo3g01639 281 Gene3D - 44 281 IPR036457 -
Pumo3g01639 281 SMART PP2C_4 25 278 IPR001932 -
Pumo3g01639 281 PANTHER PROTEIN PHOSPHATASE 34 279 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01639 Pumo-Chr3 25346265 25348508 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01639 1 280 PP2C-type Phosphatase Gene Family AT3G23360 47.872 8.74e-85 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01639 K19704 - gmx:100785227 498.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g01639 3 25346265 25348508 Pumo3g01639 3 25346265 25348508 ECH