Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01638 ATGTTAAAGTGGATCCGAGGTTCTTTTATAAAAGTAACAGAACACAAAACCCTAGTTAGTGTTGGTGTTCCTCAACCCACCGTCTCTGCCTCTCTGCAATCCATAGCCGAAAATGGTGATTCCTCTTCTTCTCTTCTCTACGCCGCTCGTTCTCTTTCATTCTCCTATTCTAACCGTGTTTTCTGTGTTCAGCCTTTCAAGAGGTACGTTGAGATCGGGAGGGTTGCTCTCATCAACTACGGCAAGGAATATGGCAGGCTCGTCGTCATCGTCGACGTCATTGACCAGAACAGAGCACTTGTCGATGCCCCTGATATGGTGAGGTCCCAAGTCAATTTCAAAAGGCTTTCCCTAACCGACATTAAGATTGACATCAAGAGGGTCCCCAAGAAGAAAGATCTCGTTAAAGCCATGGAAGCTGCTGATGTTAAGAACAAGTGGGAGAACAGCTCATGGGGCAGAAAACTCATTGTTAGAAAGAGAAGGGCATCCCTCAATGATTTTGATAGGTTCAAGCTAATGTTGGCCAAGATCAAGAGGGCAGCGGTTGTAAGGCAAGAGATTGCTAAGCTGAAAAAGAGCGCCTAG 588 0.4592 MLKWIRGSFIKVTEHKTLVSVGVPQPTVSASLQSIAENGDSSSSLLYAARSLSFSYSNRVFCVQPFKRYVEIGRVALINYGKEYGRLVVIVDVIDQNRALVDAPDMVRSQVNFKRLSLTDIKIDIKRVPKKKDLVKAMEAADVKNKWENSSWGRKLIVRKRRASLNDFDRFKLMLAKIKRAAVVRQEIAKLKKSA 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01638 195 CDD KOW_RPL14 70 142 IPR041985 -
Pumo3g01638 195 Pfam Ribosomal protein L14 108 180 IPR002784 GO:0003735|GO:0005840|GO:0006412
Pumo3g01638 195 Gene3D - 64 147 IPR014722 -
Pumo3g01638 195 Gene3D - 155 190 - -
Pumo3g01638 195 FunFam 60S ribosomal protein L14-1 64 147 - -
Pumo3g01638 195 SUPERFAMILY Translation proteins SH3-like domain 68 156 IPR008991 -
Pumo3g01638 195 PANTHER 60S RIBOSOMAL PROTEIN L14 65 194 IPR039660 GO:0003723|GO:0003735
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01638 Pumo-Chr3 25342350 25343272 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01638 66 194 Cytoplasmic Ribosomal Protein Gene Family AT4G27090 82.171 4.73e-74 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01638 K02875 - gmx:100499889 246.128
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g01638 3 25342350 25343272 Pumo3g01638 3 25342350 25343272 ECH