Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01619 ATGGGAGGGATGGGCAAGACAACCATTGCCAAAGCCTTGTTTTCTCAACTCTTTCCGCAATGTGATGTTGTCTTTTTCTTACCAAAGGATAGAGAGGAATTCAAAAGGATTGGAGAAATATCTTTACGTGATAAGCTACTTTCTGACCTACTTAAGGAAGGTCATGATGAGACGAGCCTTAGCAATAAAAAAGTTTTGATTGTACTTGATGATGTGGATAGTTTAGATCAATTAAATAAGTTGTGTGAACTGAGAAACTATGTAGGTCCAGATAGTAAACTTATTATAACAACAAGAAATAGGGATTTGCTTACGGGAAGAGTTGATGATATATATGAGGTCAAGGAATGGAGCTTTGCCAAACCTCTAGAGCTTTTTTGTTTACATGCCTTCCCGAAAAGACATACTAGTAAGAGACACGAGGATCTCTCAAAATGGGCCGTGGAATATGTAAGGGGAGTTTCTTTAGCTTTAAAAGTTTTGGGTTCTAATCTTCATTCCAGAAGTACAAAATTCTGGGACGGTGCATTGAACAAACTCAAGAAATGTTCGCAACACAAAATTCAAGATGTCAATCAAGTGAGCTGTGATGGATTAGACGACCTAGAGAAGGAAATATTTCAAGACATTGCATTCATTTTCAAAAGTGAACATAAAAATGATGTCATAAGAATGCTAGATGGTTGTGATTTCTGCACTACCAGTGGAGTAGAGGTCCTTGAAGATAAAGCTCTTATAACTATTTCACATTTTGGGACAATACAAATGCATGACTTGAATATAGTTGGTGGAGGAAGTAAAGATCCCGGAAAACGTTGTCAATTGAGAGAGATAGAAGGAGTTTCTGATGTACTTGAAAATAAAAAGGGAAGTGATTTAATTGAAGGGATAAAATTAGATTTGTCTCCCAATGCTGACGCATTTGACAAGATGACTAATTTAAGCAGCACAGGAATTGAAATTTTGGACTCTTCAAAGCGTCCAAGAAAGCATCAGTCACTCAATGTGCATGATTTGAAACATGGTAAGCTTCCAAATGAGTTATTTTCCCTAGAATATCTATGTGAGCTTAGGATTTGTAATGGTGGAATAGCAATTGAGGGAGGGATGCTAGATGTGTTATTTAGTAGGGCAACATCTCTACGGGTACTACACTTGAAGAATTGTTGTAACTTGAGTGAGCTCCCTACAAACATGTATGGCTTATTAAATTTATATGAGCTAATACTAGATGGTAGCTGTGTGAAGACACTGCCAGTTAGCATCAGGTTTCCCCCAAGACTGAACACTCTGTCATTAGAGAATTGTAGGAAGCTTGAGAGTCTGCCAGAGCTTCCAACAAATGTCGCAGTGTTTATTGCCGTGAACTGCAGGTCATTGAGGACAATATCAACTTTAACAAATTTCCTAAATAATACATGGAAGGGCATAACCGTTTCATTGCAGAATTGTAATTTACTGGAATCACCTTCGCTCCATTACATTATGGTGTTTGCTCACTTAGCAACCAAGAGTGCAGTGCTTGAAAGTGTGATTAATAAAGAGATAATGCATCGAGGCAGAAACACCAAAATAAATCATAATTATGAGTCTGTCAAGTTTTGTTTCCCAGGAAGCAAAGTCCCAAGGCAGTTCAAATATCAAACAGAACCACACTTCTCAGTCACTGTTGATCTTCATTCTTCTCCCCAATTGCAGTTTGTGGGATTAATTTTGTGTGTGGTACTTTCGCCCTCCCGGGAAATGAAGAAGAACCTTGGTGTTAAAATCTGGTGTCAGTGCTACTTGGCAGATGGTAAGAAGTTGGGACCCGCAACCACATGGGATCACAAAGCCGTCCCTGGGTTGAATTCTGATCATGTTTTTATGTGGTGCGACTCGAGCCACTTTAGCAGCATCTTCGACACCGAAACACGACGTGTTTCCTTTAAGTTCTTCGTTACAAATGATATGGAGGAACGTGTGACCATCCATATCCCAGAGTGTGGGGTCTACCTAATATTTAGAAATCAATATAACAATTGTTCTTGTCAAATAGCGAGAATGCATAAGTGCGGTCGCGGGGAATATGGTTTGGAATTGAATGACATAAATGATGATGAACCAGTGAGGCGTCCACGGTTAGCCGTTGACATTCTTTCAGAAAGGATGATACAAGAAGGACTGCTGTAG 2172 0.3918 MGGMGKTTIAKALFSQLFPQCDVVFFLPKDREEFKRIGEISLRDKLLSDLLKEGHDETSLSNKKVLIVLDDVDSLDQLNKLCELRNYVGPDSKLIITTRNRDLLTGRVDDIYEVKEWSFAKPLELFCLHAFPKRHTSKRHEDLSKWAVEYVRGVSLALKVLGSNLHSRSTKFWDGALNKLKKCSQHKIQDVNQVSCDGLDDLEKEIFQDIAFIFKSEHKNDVIRMLDGCDFCTTSGVEVLEDKALITISHFGTIQMHDLNIVGGGSKDPGKRCQLREIEGVSDVLENKKGSDLIEGIKLDLSPNADAFDKMTNLSSTGIEILDSSKRPRKHQSLNVHDLKHGKLPNELFSLEYLCELRICNGGIAIEGGMLDVLFSRATSLRVLHLKNCCNLSELPTNMYGLLNLYELILDGSCVKTLPVSIRFPPRLNTLSLENCRKLESLPELPTNVAVFIAVNCRSLRTISTLTNFLNNTWKGITVSLQNCNLLESPSLHYIMVFAHLATKSAVLESVINKEIMHRGRNTKINHNYESVKFCFPGSKVPRQFKYQTEPHFSVTVDLHSSPQLQFVGLILCVVLSPSREMKKNLGVKIWCQCYLADGKKLGPATTWDHKAVPGLNSDHVFMWCDSSHFSSIFDTETRRVSFKFFVTNDMEERVTIHIPECGVYLIFRNQYNNCSCQIARMHKCGRGEYGLELNDINDDEPVRRPRLAVDILSERMIQEGLL 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01619 723 Gene3D - 1 110 IPR027417 -
Pumo3g01619 723 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 505 IPR044974 GO:0006952
Pumo3g01619 723 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 210 IPR027417 -
Pumo3g01619 723 PRINTS Disease resistance protein signature 59 73 - -
Pumo3g01619 723 PRINTS Disease resistance protein signature 151 165 - -
Pumo3g01619 723 PRINTS Disease resistance protein signature 376 392 - -
Pumo3g01619 723 Pfam C-JID domain 536 671 IPR045344 -
Pumo3g01619 723 Gene3D Ribonuclease Inhibitor 300 507 IPR032675 -
Pumo3g01619 723 Gene3D - 120 206 IPR042197 -
Pumo3g01619 723 Pfam NB-ARC domain 1 190 IPR002182 GO:0043531
Pumo3g01619 723 SUPERFAMILY L domain-like 312 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01619 Pumo-Chr3 25116413 25119489 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01619 3 449 WRKY Transcription Factor Family AT4G12020 29.070 2.20e-32 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01619 - - gmx:121172892 421.779