Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01618 ATGATGACTAATTTAAGAATTCTTAGATTATACGTCCCTTCGGGTAAAAGTTCAGGAAATGTGCACCATTCTGGCATCCTTAGTAAATTGTCTGGTAAATTGAGGTACCTTGAGTGGAATGGATGCCATTTGAAGTGTCTTCCTGTAACTTTTTGTGCTAAGATGCTTGCTGAGATTTGCATGCCGCACAGCCATGTTACAGAACTTTGGCAGGGGGTGCAGGATGTTGTGAATTTAGTGCGAATTGATTTAAGTGAATGCAAGAACTTAAAAAATCTCCCTGATTTGTCTAAGGCGTCAAAACTTAAATGGGTGAATCTTTCTGGTTGTGAAAGCTTGTGTGATATTCATCCATCTGTTTTCTCTTTTGACGCACTTAAATCTTTGATACTAGATGGCTGCAAAAAGCTCAAGAGTCTTAAGATTGAGAAACATTTAACATCTCTGGAGAAGATTAGTGTTAATGGCTGCACTAGTCTCAAGGAATTCTCGGTGTCATCAGATTCAATCACAAGCTTGGATTTAAGCAGCACAGGAATTGACATGTTGGACTCTTCATTTGGGCGCCTAACAAATCTCGAGTCACTTAATGTACAAGGTTTGAGATATGGTAATCTTCCAAATGAGTTATTTTCACTAAAAGATCTTGAGGAGCTTAGGATTTGTAATTGTAGAGTAGCAATTGACAAACAGAAGCTACATGTGTTGTTTGATTGCTCAACATATCTACGACTACTACACTTGAAGGATTGTTGTAACTTGTGTGAGCTCCCTGACAACATGGGTTGCTTATCAAACTTATATGAGCTAAGACTAGATGGTAGCTGTATGAAGACATTGCCCGCTAGCATCATGCATCTCAACAGTTTGGAAACTCTGTCCTTAGAGAACTGTAGGAAGCTTGGGAGTCTACCAGAGCTTCCACCAAGTGTCACAGAGTTTAATGCTGTGAATTGCAGGTCATTGAGGACAGTATCCACTTTAAAGACTTTTTCAATTAACATGGCAGGGAAGGGCAGATTCATTTCATTCCAGAATTGTGTTGGACTGGATGAACCTTCTCTCCACTGCATTATGGAGGATTCCCACTTAGCAACCAAGAGTGCAGTGTGTCATAATATATATGTAAAAAGATCTGGAGCCAAAAGAGGTTTTTTCCATCATGACTTTGTGAAGGTTTGTTTCCCAGGAAGCAGAGTCCCTGGGCAGTTCAAATATCGAACAAGACACTCCTCAATCACTATTGATCTTCCTTCTTCCCAATCTGACATTGTGGGATTAACTTTGTGTGTGGTACTTTCACCCTCCCGGGTAATGAAGAACCTTGGTGCTAAAATCTGGTGTCAGTGCTACTTCGCAGATGGTACGAGGTTGAGACCTGCGACCACATGGTATGATACAGCTGTCACTGGGTTGAATTCTGATCATGTTTTTATATGGTATGATTCGTGCCACTTTGACAGCATTCTCGAAGTTTATGACACTGGCGAACGACGAGTTTCCTTTGAGTTCTTCATTACAAATGATATGGAGGAACGTGTGACCATTGGTACCAGAGAATGTGGGGTTTGCCTAATATTTGACTCAGAACAAGATTTGCATAGTCCGGTATGGGAATCGTATGTCTGGGTATATGGTTTGAAGTTGAAATCACAACATAGTGCAACCTCAATGGCAATTGAAACGTCTTATGAGAACAATTGCAATGACATAAATAATCACAAGCGGGATTTGAGTGAATGTTATTCTTGTTCATGCGACTGCTTATTTGATGTCTTAAGGTATTTATGGAGGTTGATCCGCATTTAG 1809 0.4024 MMTNLRILRLYVPSGKSSGNVHHSGILSKLSGKLRYLEWNGCHLKCLPVTFCAKMLAEICMPHSHVTELWQGVQDVVNLVRIDLSECKNLKNLPDLSKASKLKWVNLSGCESLCDIHPSVFSFDALKSLILDGCKKLKSLKIEKHLTSLEKISVNGCTSLKEFSVSSDSITSLDLSSTGIDMLDSSFGRLTNLESLNVQGLRYGNLPNELFSLKDLEELRICNCRVAIDKQKLHVLFDCSTYLRLLHLKDCCNLCELPDNMGCLSNLYELRLDGSCMKTLPASIMHLNSLETLSLENCRKLGSLPELPPSVTEFNAVNCRSLRTVSTLKTFSINMAGKGRFISFQNCVGLDEPSLHCIMEDSHLATKSAVCHNIYVKRSGAKRGFFHHDFVKVCFPGSRVPGQFKYRTRHSSITIDLPSSQSDIVGLTLCVVLSPSRVMKNLGAKIWCQCYFADGTRLRPATTWYDTAVTGLNSDHVFIWYDSCHFDSILEVYDTGERRVSFEFFITNDMEERVTIGTRECGVCLIFDSEQDLHSPVWESYVWVYGLKLKSQHSATSMAIETSYENNCNDINNHKRDLSECYSCSCDCLFDVLRYLWRLIRI 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01618 602 Gene3D Ribonuclease Inhibitor 1 168 IPR032675 -
Pumo3g01618 602 Gene3D Ribonuclease Inhibitor 169 350 IPR032675 -
Pumo3g01618 602 Pfam C-JID domain 395 530 IPR045344 -
Pumo3g01618 602 SUPERFAMILY L domain-like 22 325 - -
Pumo3g01618 602 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 29 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01618 Pumo-Chr3 25107320 25113600 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01618 2 316 WRKY Transcription Factor Family AT4G12020 29.938 1.10e-24 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01618 - - ccaj:109795381 795.038