Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01595 ATGGATGAAGAAGGGTCAAGGGGGAGGGCCAAGGAGGACGGTGGAGACGTCCGGTACCGGGGGGTCCGACGGCGGCCATGGGGGAAGTTCGCGGCGGAGATTCGTGACTCGACGAGGCAGGGTCAGAGGGTGTGGCTAGGGACTTTCAACACGGCGGAGGAAGCAGCCAGAGCCTATGATAGAGCTGCTTATTCTATGAGGGGTCCATTTGCAATCCTTAACTTTCCTGATGAGTACCCTATGACTGCTGGTGGTGCCACTAATGCTGCCACTTATTCCTCTGCTGCTTCTTCGTCATCATCCTCAGCCTCTTCTTCTAGGCACGCCAATGTGGAAGCCAGAGGAAGAAGTGACCAAGGAAGGCAAGTGTTTGAGTTTGAGTACTTGGATGACAAGTTGTTGGAGGAGCTTCTTGATTGTGAGGACAAAAAGAAAAAGGGACCCTGA 447 0.5369 MDEEGSRGRAKEDGGDVRYRGVRRRPWGKFAAEIRDSTRQGQRVWLGTFNTAEEAARAYDRAAYSMRGPFAILNFPDEYPMTAGGATNAATYSSAASSSSSSASSSRHANVEARGRSDQGRQVFEFEYLDDKLLEELLDCEDKKKKGP 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01595 148 Gene3D AP2/ERF domain 17 77 IPR036955 GO:0003700|GO:0006355
Pumo3g01595 148 SUPERFAMILY DNA-binding domain 18 78 IPR016177 GO:0003677
Pumo3g01595 148 SMART rav1_2 18 82 IPR001471 GO:0003700|GO:0006355
Pumo3g01595 148 CDD AP2 18 77 IPR001471 GO:0003700|GO:0006355
Pumo3g01595 148 PRINTS Ethylene responsive element binding protein signature 19 30 IPR001471 GO:0003700|GO:0006355
Pumo3g01595 148 PRINTS Ethylene responsive element binding protein signature 42 58 IPR001471 GO:0003700|GO:0006355
Pumo3g01595 148 Pfam AP2 domain 18 68 IPR001471 GO:0003700|GO:0006355
Pumo3g01595 148 MobiDBLite consensus disorder prediction 93 117 - -
Pumo3g01595 148 FunFam Ethylene-responsive transcription factor 2 18 77 - -
Pumo3g01595 148 MobiDBLite consensus disorder prediction 93 110 - -
Pumo3g01595 148 ProSiteProfiles AP2/ERF domain profile. 18 76 IPR001471 GO:0003700|GO:0006355
Pumo3g01595 148 PANTHER DNA-BINDING DOMAIN 12 143 IPR044808 GO:0003700|GO:0009873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01595 Pumo-Chr3 24559595 24560452 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01595 13 145 AP2-EREBP Transcription Factor Family AT3G23230 62.406 5.81e-44 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Pumo3g01595 AP2 1.8e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01595 - - gmx:100775830 202.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g01595 3 24559595 24560452 Pumo3g01595 3 24559595 24560452 ECH