Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01592 ATGGTCTTAGTCCAGGTGGGCTATAGCCTCTTATATTTAATCACTAAAGCCTCCTTCAATCATGGGATGAGCCCTTATGTGTATGTAACCTATCGGCATATTCTGGCTGCGGTTTTGATGTTTCCTTTTGCATACTTTCTGGAGAGAAATGCAAGACCAAAGCTGACATTTTCTCTTTTCATGGAAATTTTTGTGCTTTCTCTGTTAGGGGTTAGTTTAACTATAAATATGCACTTTGCAAGCCTGAAATACACAAATCCAACCTTTGTTGTTGCAATGCTCAACACCATACCTACCCTTACCTTCATTTTTGCAGTGGCACTCAGGTTTGAGGTTCTTGATCTTCGGAATCCTAGAGGGATAGCAAAAGTTTTAGGGACGTTGATCTCCCTAGCTGGTGCTTTGATCATGACACTATACAAAGGACTCGTTATGAGAAATTTATGGCCTCCTCTAATCCATTTTCCAGGAAAAAGTGCTGCTATCAATGAGAGCTTAAAAGGCTCACTTCTTACAATTTTGAGCTGTGTTACATGGTCTATATGGTACATTATGCAGGCAGCCACTTTGAAAAGATACCCTGCCCCACTGTCACTCACCATGTGGATGTGCTTCGTTGGAGCAGGCCAATCAGCTGTTTTCACAGTTATAGCTGAACGCAACCCTTCGGTATGGACTATAGGGTTCAACATTGACTTGTGGTCAACAATATATGGTGGAATTGTCGTAGCCGGATTGATAATCTATGTTATACTGTGGTGCAATGAGAAAAAAGGGCCAGTTTTTGTGACAATGTTTTACCCTCTTTGTACGGTGTTAGCGAATATTCTAGCATACTTCGTCCTTGGTGAGAAACTTTATTTGGGCAGCATCATAGGAGCATTTACAGTCATAGTTGGACTGTACTTGCTACTGTGGGGCAAAAGTGAGCAAAAGGTTTCGCAGTGCAGTACTGAAGACTCAGAATGCAAGTCAATAACTTTAGCTGGAGAGGAAGAAGTGCCCGTCCAAGTGGGAAGAGAAGAAAACAATAGAAATCATGAAACTTTCTAG 1053 0.415 MVLVQVGYSLLYLITKASFNHGMSPYVYVTYRHILAAVLMFPFAYFLERNARPKLTFSLFMEIFVLSLLGVSLTINMHFASLKYTNPTFVVAMLNTIPTLTFIFAVALRFEVLDLRNPRGIAKVLGTLISLAGALIMTLYKGLVMRNLWPPLIHFPGKSAAINESLKGSLLTILSCVTWSIWYIMQAATLKRYPAPLSLTMWMCFVGAGQSAVFTVIAERNPSVWTIGFNIDLWSTIYGGIVVAGLIIYVILWCNEKKGPVFVTMFYPLCTVLANILAYFVLGEKLYLGSIIGAFTVIVGLYLLLWGKSEQKVSQCSTEDSECKSITLAGEEEVPVQVGREENNRNHETF 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01592 350 Pfam EamA-like transporter family 9 138 IPR000620 GO:0016020
Pumo3g01592 350 Pfam EamA-like transporter family 167 305 IPR000620 GO:0016020
Pumo3g01592 350 PANTHER WAT1-RELATED PROTEIN 1 317 IPR030184 GO:0016020|GO:0022857
Pumo3g01592 350 SUPERFAMILY Multidrug resistance efflux transporter EmrE 31 141 - -
Pumo3g01592 350 SUPERFAMILY Multidrug resistance efflux transporter EmrE 225 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01592 Pumo-Chr3 24526772 24533076 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01592 1 324 Nodulin-like Gene Family AT5G07050 42.899 2.84e-91 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01592 - - gmx:100796336 556.599