Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01584 ATGGAGATAACTGGAGGAGCTGATGTTGCAGAAAGTGTAGCCCAATTCGCAAGGAGGCGTCAGCGTGGGGTTTGTGTGCTCAGTGGGAGTGGCTCAGTGGCCAATGTTACTCTTAGACAACCTTCTGCTCCTGGTGCTGTGGTGGCACTTCATGGAAGGTTTGAGATTCTATCCCTGACCGGGACTTTCCTACCTGGCCCTGCTCCTCCAGGATCCACGGGACTCACCGTATATCTAGCTGGAGGACAGGGCCAGGTAGTGGGAGGGAGTGTGGTTGGATCTCTAGTTGCAGTAGGACCCGTGATGGTCATTGCCGCAACTTTTGCTAATGCAACATATGAGAGACTTCCACTTGATGAAGATGATGAGGGGCCTAGCTCGGCCGGCGGCAGCACAAGGCGGTGGAGGATCGTCGCCGCCGCTTGGAATTGGAAGCAGTGGGGGTGCTCAGTTGCAAGGTGGGATTCCAGATCCATTATCTCTGCCTTTGTATAA 495 0.5434 MEITGGADVAESVAQFARRRQRGVCVLSGSGSVANVTLRQPSAPGAVVALHGRFEILSLTGTFLPGPAPPGSTGLTVYLAGGQGQVVGGSVVGSLVAVGPVMVIAATFANATYERLPLDEDDEGPSSAGGSTRRWRIVAAAWNWKQWGCSVARWDSRSIISAFV 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01584 164 CDD DUF296 2 80 IPR005175 -
Pumo3g01584 164 ProSiteProfiles PPC domain profile profile. 1 129 IPR005175 -
Pumo3g01584 164 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 1 127 IPR014476 GO:0003680
Pumo3g01584 164 Gene3D - 1 123 - -
Pumo3g01584 164 Pfam Plants and Prokaryotes Conserved (PCC) domain 2 109 IPR005175 -
Pumo3g01584 164 SUPERFAMILY AF0104/ALDC/Ptd012-like 2 121 - -
Pumo3g01584 164 FunFam AT-hook motif nuclear-localized protein 1 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01584 Pumo-Chr3 24426230 24427977 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01584 1 124 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 77.419 3.88e-55 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01584 - - gmx:100819125 223.016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g01584 3 24426230 24427977 Pumo3g01584 3 24426230 24427977 ECH