Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01518 ATGCAGGACCAGCATCTGCCAAACAGGCTGGACATTAATAGTAAAGATAATAATTATCAGCTGGTTTATGAGGATCTAAAGCATGTTCTTGGACTAAGGAGAACAGCATCTGATAGTAACTCAGAATTGTCAGAGATTGCTTCAGCCAGAGGATATGTTGCTGAAGTTGACAGCAGGGCTTATCCTAATAATTTAAACAGATACCAGTATGAACACGGCGGTTTCAGACAAGCATCAGGTACATTTTCTAGACAACTATCAGGTAAATTTTCTGAGGGAAATGTTTGTGATCAAGTTAATTCAGGACCAAATGCTCCATCTATTTACGTCGTTGAGTCTCCTCATTCATGCCATCCTTATGGATCAGTATTCTCAGAAGGTTCTTTCTATAAGAAGATAAAGTTTCTGTGTAGCTTTGGAGGTAGAATACTACCAAGACCAAATGATGGGAAGCTCAGATATGTGGGTGGAGAGACACGGATAATATCAATCAGGAAGAACATCACATGGGAGGAACTTATGAGGAAGACTTCTGCCATTTGCAGTCAAACTCACATTATCAAGTACCAGCTTCCTGGAGAGGATCTTGATGCTCTTATATCTGTTTGTTCCAATGAAGATCTTCATCATATGATTGAGGAGTATGAAGAGCTTGACAGAGCTGGAGGCTCTCAACGGCTGAGGATTTTTCTCATACCTTCAAATGAATGTGAGAGTCCAAGTTCCAATGAAGCAAGAATCAATCAGCCAAGTGATGCTGATTATCATTATGTTGTTGCTGTTAATGGTATGCTGGATCCAAGTCTGCGAAAGAACTCCAGTGGCCTGAATTTGGCAAGCCATACTAGCCAGTTTGGAAATACCTCTGATTACAACAGTCCACATTTCCATAGAGACTCATCCACATCTGCATTTGCTTCAGAGATGAAGGATTGCACCCCAACCTCTCCAAATTTGGCAGGCATACCCAGTCCTCAATATTTTACAGCCCTAGCAGGCAAGTCATTCAATCAAATGTCTCCTTTATCTCCCGCTTGTGTACAGCCTAAAGATCCCAAAGTTTCTAATGTACAGCTATTTAAGGATAAACCATATAATGCTATTAATGAAAGCATCAATCCCTTTGTTATGGAAAAAGTTCCACGTGACAACTCTTTGTATGTAGACAATACCAATTATGTTGATCCAGTTGCATACCATAACAATCTTGCTCAAGGGCCTACAAGTGTGAATTACCGTCCTAATAACCAATATATAGTGGAGTCTGACCTGATCAGGAAGCCTGGTGAGAATCTTCATCTTCACAGACGGAACAACAGCAGTAATGAGTTTGTCTCTTCTGCAGCATGTTGTCTAACTGATATGACTTTTGAGAGACCTTTAGTCACCAATGAAGGTTCATATCATTTTAACAAGATTGTCTCTCATCCTCATGAGTCAACGAGTTTATTCTCAGAGTCTGATGTTAAAGAGGGATCTCGGTACAGAATGTTGCATGCACGTTCTGACTCAACACTTAAGGAGAATGATGAGAACTATAAAGTTCACTTGCAATTTCCCCTTAGTGTAGAGAGAGACAATTTGCCATCACTGAAAAATTCAAGTTCTTTAGAAGAATGTTCAATACAGCTTGGAGAGATAATTGATAGGAAAGAACACTTGGCAAAGTATCAAAATTTGCCCATTTTTGGAATAACTGATAGTTTTAATGTGTCAGAAATTGGTAAAGAGATCTTGCAACATGCAGATAAAAGCAATGATTTCTTTGATGAAAATGTTGGAGCTATGTCACAAGACAATGCCATAGATTTAAAACATTTACAGTACATTTACTCTCCACATGGTGTTTGCTCATCTTCACCAGATTTACAAAGCTGTGAATGCAATTTATCTACTGCATCATCTATCTCTTTAGAATCCACAAGAAACCTGAGGGGGCAACCACGTGGTCTACCGTTAGACAGAACTGCTTCTGAGTTTTCCATGAGGAGCCAAAATTCATCAATGCATCACCAATATGCTATGCCGGAGACAAAAGACGGTCAACCACTTCTTCCTGGCTCTTTTGAGTCCCAAACTGACAAAGGGTCCATACTACCTATCTCATATATGGACATGGGTTCTTCCCTAAGAGAGCTTGTTATCCCTGTTGAAGATCCTGCATACTACCTGCACCAAAAGGAACATAACACAGTCATTAAGAATCAGTGTTCTGAATATATCAATGAATTTTGTGTCAACAAGCCTGTGCCAGAATCAGTGGCTGTTGTCAAGGGACCAACAGATTATATTTCTTCAGGTATCCAGTCATGCTTAAAAGTTGTCTCAAATGTAGATGAAGAGGCTGAAGTTGAACATACATCTCCTGAAAAGGAAGGGATAGAATGTGATAATCCAGAATCTCAAAGTAAGCATGCAGAATCTGATGGTGGAAACTTCAATAAGCCTACTGGTGATAGAGCAACTGCTGAAACAGAGGCTGAAATTTACGGTTTACAGAACATTGAGAATGATGATCTTGAAGAATTGCAAGAGTTAGGATCTGGAACATTTGGAACTGTTTATCACGGAAAGTGGAGGGGAACAGATGTTGCAATTAAGAGAATAAAAAGTAGTTGTTTCTCTGGTAGATTGTCAGAGCAAGAGCGGTTGACTAAAGATTTTTGGAGAGAGGCACAGATTCTCTCAACTCTTCACCATCCAAATGTGGTGGCATTTTATGGGGTAGTTCCAGACGGCCCAGGTGGAACATTGGCAACAGTAACAGAATACATGGTGCATGGATCACTGAGGAGTGTTCTCATGAAGAAGGAGAAAGTGCTTGACCGTCGTAAAAGGCTCCTGATTGCAATGGATGCAGCCTTTGGGATGGAATATTTGCATTTGAAAAATATTGTTCATTTTGATTTGAAGTGTGATAATTTACTTGTCAATCTGGGCGATCCTGAACGACCTGTTTGTAAGGTTGGAGATTTTGGCCTATCCAGAATTAAACGCAACACACTTGTTTCTGGTGGTGTCAGAGGAACCCTTCCATGGATGGCGCCTGAATTACTGGATGGTAACAGTTGCAGGGTATCTGAGAAGGTTGATATTTTCTCATTTGGCATTGCAATGTGGGAAATCTTGACCGGGGAAGAACCATATGCTAACATGCACTGTGGCGCTATCATAGGTGGTATTGTCAATAATACGCTCAGGCCTCCGATTCCAAAACGATGCGATTCCGAGTGGAAAAAGCTGATGGAAGAGTGCTGGAGTCCTGATCCTGCAGCCAGGCCAACCTTCACAGAAATTAAAAGTAGACTCCGCAACATGTCAGCTGCACTGCCCAAAAAGAGACATGCCATTGGTAAACGATGA 3363 0.4071 MQDQHLPNRLDINSKDNNYQLVYEDLKHVLGLRRTASDSNSELSEIASARGYVAEVDSRAYPNNLNRYQYEHGGFRQASGTFSRQLSGKFSEGNVCDQVNSGPNAPSIYVVESPHSCHPYGSVFSEGSFYKKIKFLCSFGGRILPRPNDGKLRYVGGETRIISIRKNITWEELMRKTSAICSQTHIIKYQLPGEDLDALISVCSNEDLHHMIEEYEELDRAGGSQRLRIFLIPSNECESPSSNEARINQPSDADYHYVVAVNGMLDPSLRKNSSGLNLASHTSQFGNTSDYNSPHFHRDSSTSAFASEMKDCTPTSPNLAGIPSPQYFTALAGKSFNQMSPLSPACVQPKDPKVSNVQLFKDKPYNAINESINPFVMEKVPRDNSLYVDNTNYVDPVAYHNNLAQGPTSVNYRPNNQYIVESDLIRKPGENLHLHRRNNSSNEFVSSAACCLTDMTFERPLVTNEGSYHFNKIVSHPHESTSLFSESDVKEGSRYRMLHARSDSTLKENDENYKVHLQFPLSVERDNLPSLKNSSSLEECSIQLGEIIDRKEHLAKYQNLPIFGITDSFNVSEIGKEILQHADKSNDFFDENVGAMSQDNAIDLKHLQYIYSPHGVCSSSPDLQSCECNLSTASSISLESTRNLRGQPRGLPLDRTASEFSMRSQNSSMHHQYAMPETKDGQPLLPGSFESQTDKGSILPISYMDMGSSLRELVIPVEDPAYYLHQKEHNTVIKNQCSEYINEFCVNKPVPESVAVVKGPTDYISSGIQSCLKVVSNVDEEAEVEHTSPEKEGIECDNPESQSKHAESDGGNFNKPTGDRATAETEAEIYGLQNIENDDLEELQELGSGTFGTVYHGKWRGTDVAIKRIKSSCFSGRLSEQERLTKDFWREAQILSTLHHPNVVAFYGVVPDGPGGTLATVTEYMVHGSLRSVLMKKEKVLDRRKRLLIAMDAAFGMEYLHLKNIVHFDLKCDNLLVNLGDPERPVCKVGDFGLSRIKRNTLVSGGVRGTLPWMAPELLDGNSCRVSEKVDIFSFGIAMWEILTGEEPYANMHCGAIIGGIVNNTLRPPIPKRCDSEWKKLMEECWSPDPAARPTFTEIKSRLRNMSAALPKKRHAIGKR 1120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01518 1120 ProSitePatterns Protein kinases ATP-binding region signature. 846 867 IPR017441 GO:0005524
Pumo3g01518 1120 MobiDBLite consensus disorder prediction 781 804 - -
Pumo3g01518 1120 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 152 234 - -
Pumo3g01518 1120 CDD PB1_UP2 136 232 - -
Pumo3g01518 1120 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 833 927 - -
Pumo3g01518 1120 MobiDBLite consensus disorder prediction 781 821 - -
Pumo3g01518 1120 ProSiteProfiles Protein kinase domain profile. 840 1110 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g01518 1120 Gene3D Transferase(Phosphotransferase) domain 1 928 1118 - -
Pumo3g01518 1120 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 928 1119 - -
Pumo3g01518 1120 Pfam Protein tyrosine and serine/threonine kinase 842 1103 IPR001245 GO:0004672|GO:0006468
Pumo3g01518 1120 SUPERFAMILY Protein kinase-like (PK-like) 830 1102 IPR011009 -
Pumo3g01518 1120 Gene3D - 151 234 - -
Pumo3g01518 1120 Pfam PB1 domain 148 232 IPR000270 GO:0005515
Pumo3g01518 1120 PANTHER SERINE-THREONINE PROTEIN KINASE 177 1104 - -
Pumo3g01518 1120 PRINTS Tyrosine kinase catalytic domain signature 1030 1052 IPR001245 GO:0004672|GO:0006468
Pumo3g01518 1120 PRINTS Tyrosine kinase catalytic domain signature 1074 1096 IPR001245 GO:0004672|GO:0006468
Pumo3g01518 1120 PRINTS Tyrosine kinase catalytic domain signature 922 935 IPR001245 GO:0004672|GO:0006468
Pumo3g01518 1120 PRINTS Tyrosine kinase catalytic domain signature 959 977 IPR001245 GO:0004672|GO:0006468
Pumo3g01518 1120 ProSitePatterns Serine/Threonine protein kinases active-site signature. 965 977 IPR008271 GO:0004672|GO:0006468
Pumo3g01518 1120 SMART serkin_6 840 1109 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g01518 1120 SUPERFAMILY CAD & PB1 domains 148 241 - -
Pumo3g01518 1120 SMART PB1_new 147 234 IPR000270 GO:0005515
Pumo3g01518 1120 CDD STKc_MAP3K-like 846 1103 - -
Pumo3g01518 1120 Gene3D Phosphorylase Kinase; domain 1 833 927 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01518 Pumo-Chr3 23645056 23653022 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01518 93 280 MAP Kinase Kinase Kinase AT1G16270 49.479 6.08e-41 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Pumo3g01518 PK_Tyr_Ser-Thr 5.3e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01518 - - gmx:100810711 2052.71