Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01510 ATGGAGGATGTGAAGGTGTTTGGTCTGTGGGCAAGTCCATTTACCCAGAGGGTTGTTTGGGCACTAAAATTGAAGGGTGTGACTTATGAGTACATTGGTGAAGATCTTGCCAACAAGAGCAACCTGTTATTGCAATACAATCCAATCTACAAGAAGGTTCCAGTACTTGTGCATAATGGAAAACCAATAGCAGAGTCAATGGTCATTCTTCAATACATTGATGAGATGTGGCCTCATACCCCTCTCTTACCCCAAGATGTTCACCACCGCTCCACTGTTCGGTTCTGGTCAAAATTCATCGACGAAAAGACAATAGACATGTGGAAATTTTTTCGGTTTGATGGAGAACTACAAGACAGGGCAATGAAAGAGACTTTGGAGACTTTGAGAGTGATAGAGAAGGAAAGTGGGCTTGGTAAAAAGAAATTCATGGGTGGCAACACAATTGGATTGGCAGACCTAGCCTTGGGATGGGTTGCACATACTTTGGTAGCCATGGGGGATGTGATTGGAGTCAAGATCATCACTAGCTGA 534 0.4363 MEDVKVFGLWASPFTQRVVWALKLKGVTYEYIGEDLANKSNLLLQYNPIYKKVPVLVHNGKPIAESMVILQYIDEMWPHTPLLPQDVHHRSTVRFWSKFIDEKTIDMWKFFRFDGELQDRAMKETLETLRVIEKESGLGKKKFMGGNTIGLADLALGWVAHTLVAMGDVIGVKIITS 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01510 177 CDD GST_C_Tau 90 176 IPR045074 GO:0004364|GO:0006749
Pumo3g01510 177 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 6 161 IPR045073 -
Pumo3g01510 177 CDD GST_N_Tau 4 77 - -
Pumo3g01510 177 FunFam Glutathione S-transferase U10 1 82 - -
Pumo3g01510 177 SFLD Glutathione Transferase (cytosolic) 1 176 IPR040079 -
Pumo3g01510 177 Gene3D - 86 177 - -
Pumo3g01510 177 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 86 177 IPR010987 -
Pumo3g01510 177 Pfam Glutathione S-transferase, N-terminal domain 3 75 IPR004045 -
Pumo3g01510 177 SUPERFAMILY Thioredoxin-like 3 103 IPR036249 -
Pumo3g01510 177 SUPERFAMILY GST C-terminal domain-like 75 175 IPR036282 -
Pumo3g01510 177 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 81 IPR004045 -
Pumo3g01510 177 SFLD Main.3: Omega- and Tau-like 1 176 IPR045073 -
Pumo3g01510 177 Gene3D Glutaredoxin 1 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01510 Pumo-Chr3 23549904 23551781 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01510 2 175 Glutathione S-transferase Gene Family AT2G29420 48.000 9.39e-56 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01510 K00799 - tcc:18602840 242.662