Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01503 ATGTCAGATATACCCGAGACTTCTTCAGCAAGAATGGCAGCTTCTAAAACAAATTCAAGAAGCACAGATCAACCAAACAATGAAGTTGTTTGGGAGCATTTATCTTTAGAAGAGAAGCTTGCTGCAGCAGAGAGTCTTTCAGTTTATTGCAAGCCTGTAGAGCTCTACAACTATCTTCGGTCTCGTGCTAACGAATATTCATTACACCTTCGGAGATGTTTGGACTACAAGATAAAGGCTAAGCGCAAGAAGAGGATTATAATGACAGCTACGTTGTCATGGAAAGATGATGAAGATTGCTCTCTATTTCCTTTGTGTATCTGTCTGGGAAGGCTGGATCCTAATAAGGGAGCTCGAAGGGCACAAAGGTATCATGTTGGTCGAATATTCACATTTCAAGGTCTCTCTGGAATTGATGGGAAGGGGAATACTCAACTCGAAGTAAACTTTATGCTTCCAGAATTTGATAAGTTAGTTGCGCAATTTAACTCTGGCGAATATTGTCTCTTGATTTTCGCCTCTGCGGAGAACCCAATTTCATTATCTAGAGCCAATGCGGGCTCATGGCCTGTGGAGGTGGCTTCTAATGAATCATGGGGTGGAGAGAAATGCTTATATGGAAAAGTATATTTGAATTTTCTTCATGATAAATGGAAATTATCTCCCCATTTTCCTTTGCGAGAGCCAGGCAACATTAGGGCTGGCATTACTTTGAATCCATGTATTTTGACGTATTATTTGCAGTATTGTTTTCAAAGAAAGAGCAAGATCATCTCAATTCAAGATTCCAGGAATTCTAAGGGTAATTTAAAGCAACTTGAAATCTCATTTTGTGCTGAAGAATTTGGAGCTTGGGAAAAATCTCAATGCCAGACAGATGAAAGCAGAGAAGTAGCATCGATGTCGACATCGCCATCATCATCTCGTATCTTTTGGTTGAAAGAAGGAAATGTCGCATTTCATTACAGGTATTACTATAATAAGTTGCACAGAACGGAAGTTACTGAAAATTTCACCTGTCCATTTTGTTTGGTTCGATGTTCAACATACAAGGGATTAAAATGCCACCTAGAATCGTCACATGAGTATTTTAATTTTGAATTTTCGAAATCGGAGGATCGCCCAACTGTCTCTGTGTCTATGAAGACCGCAATGTGGAGTCTACAGCGTGTTGATCCAAGAGTACAAACTTTTCGCTATTGTGCCAAACGACTTAGGCATAGAGAACCGAAGAATGCATCTCGTGGTAGAACAAATGATACAGACCAACTGCCCATCCATGCTGAAATTCCTACAGAATCAAAGGCAATTATTTTACATCCTGGTCTGGACTGTGTCCCATCCATATCTGATCATAATAATGGGACACATGCAATGCTACAAGTTGACCATGAAGGGGCTTCAGATGCTATTTTACATCCTGGTCCAGATTGTGTCCCATTAATATCTGATCATGATGATGGAACACATGCAATGCTACAAGATGACCATGAAGGGGTTTTAAATGCAATTTTACATCCTGGTCTAGATTGTGTCCCATCAATATCTGATCATGATAATGGGACACATGAAATGCTACAAGATGACCATGAAGGGGTTTCAAATGCAATTATTTTATATCCTGGTCCGGAGTGTGTCCCATCAACATCTGAAGTGCCACAAGCTAGGAAGAAAGACAAGTTACCAATTGAGCAACATGACCCAAATATCGTTGCCCGGTATGAGAAGCGGCAGTTTTATCACTCTCACAAATACCAGCCTATGGCACTTGAAGAAGTGCTAGTAGATGAAGATAGTGAGGATGAAATGAATGAGGGCGCTCAAGAGATTGAAGATCGAAGGAAACTTGCTATTCTTGATGCGCCCGACCATGTGAAGCAGTTCCTACCTATGTGGAACGCATTTATTAAGAAACATCGTGTGCTAGCAGATGGTCACATGAATTGGGCATGTGAAGCTTTCACAAAATATCATTGTGCTGAACTTGCTCAGTCCCCCTCATTAGCCTGGTGTTGGAGACTGTTTATGATCAAACTAATTAGTCATGGTCTTCTAAAGATACCGACCTTTCATGCGTGCACTGTTATTCTCGAACAATACCAGAAGCAGAATCAAGATCCCAAAAGCTAA 2130 0.4061 MSDIPETSSARMAASKTNSRSTDQPNNEVVWEHLSLEEKLAAAESLSVYCKPVELYNYLRSRANEYSLHLRRCLDYKIKAKRKKRIIMTATLSWKDDEDCSLFPLCICLGRLDPNKGARRAQRYHVGRIFTFQGLSGIDGKGNTQLEVNFMLPEFDKLVAQFNSGEYCLLIFASAENPISLSRANAGSWPVEVASNESWGGEKCLYGKVYLNFLHDKWKLSPHFPLREPGNIRAGITLNPCILTYYLQYCFQRKSKIISIQDSRNSKGNLKQLEISFCAEEFGAWEKSQCQTDESREVASMSTSPSSSRIFWLKEGNVAFHYRYYYNKLHRTEVTENFTCPFCLVRCSTYKGLKCHLESSHEYFNFEFSKSEDRPTVSVSMKTAMWSLQRVDPRVQTFRYCAKRLRHREPKNASRGRTNDTDQLPIHAEIPTESKAIILHPGLDCVPSISDHNNGTHAMLQVDHEGASDAILHPGPDCVPLISDHDDGTHAMLQDDHEGVLNAILHPGLDCVPSISDHDNGTHEMLQDDHEGVSNAIILYPGPECVPSTSEVPQARKKDKLPIEQHDPNIVARYEKRQFYHSHKYQPMALEEVLVDEDSEDEMNEGAQEIEDRRKLAILDAPDHVKQFLPMWNAFIKKHRVLADGHMNWACEAFTKYHCAELAQSPSLAWCWRLFMIKLISHGLLKIPTFHACTVILEQYQKQNQDPKS 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01503 709 MobiDBLite consensus disorder prediction 1 26 - -
Pumo3g01503 709 CDD VEFS-box_EMF2-like 576 700 - -
Pumo3g01503 709 CDD ZnB-Zn_EMF2-like 314 386 - -
Pumo3g01503 709 Pfam VEFS-Box of polycomb protein 561 694 IPR019135 -
Pumo3g01503 709 PANTHER POLYCOMB GROUP PROTEIN 33 708 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01503 Pumo-Chr3 23474782 23489730 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01503 550 701 C2H2 Transcription Factor Family AT5G51230 49.020 5.27e-36 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01503 - - gmx:100814462 736.102