Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01501 ATGAACCATGTCACTGTAACCGAGCAATGGAGCGACGTGCCGTTTATGATGGACGACGCTGACGACATGATCATCTTCAACTCCCTCCGAGACGCCGTTTCACACGGTTGGTCTTTGTCCGACAACACAACACCAAAACCGGAAAACGACGCCGCAGCGAGACCAGCTCACGGAACAAGTTACCCCAACGACGATTCCAAAGCTGTCGTTTTAACGCAGAAGAAAAAGAACAAGAGTTTGGGAACTTGCTACAGAGGAGTGAGGCAAAGACCGTGGGGAAAGTTCACGGCCGAGATTCGCGACCCGACTCGGAACGGCGCGAGGGCGTGGCTTGGCACTTATCAAACGGCTGAGGATGCAGCTCTGGCTTATGATCAAGCCGCGTTCAAGCTACGCGGCTCGAAGGCTTTGCTGAACTTTCCGCACCGAGTAAACTTCAATGAGCCGCCGCCGGTGAGAGTCACGGCTAAGAAACGGAAAGGACCGGCTCCGGTGAAGCTGAGTCGGACTTGA 513 0.5458 MNHVTVTEQWSDVPFMMDDADDMIIFNSLRDAVSHGWSLSDNTTPKPENDAAARPAHGTSYPNDDSKAVVLTQKKKNKSLGTCYRGVRQRPWGKFTAEIRDPTRNGARAWLGTYQTAEDAALAYDQAAFKLRGSKALLNFPHRVNFNEPPPVRVTAKKRKGPAPVKLSRT 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01501 170 FunFam Ethylene-responsive transcription factor 2 82 142 - -
Pumo3g01501 170 MobiDBLite consensus disorder prediction 39 65 - -
Pumo3g01501 170 PANTHER DNA-BINDING DOMAIN 48 148 IPR044808 GO:0003700|GO:0009873
Pumo3g01501 170 SUPERFAMILY DNA-binding domain 83 143 IPR016177 GO:0003677
Pumo3g01501 170 CDD AP2 84 142 IPR001471 GO:0003700|GO:0006355
Pumo3g01501 170 SMART rav1_2 83 147 IPR001471 GO:0003700|GO:0006355
Pumo3g01501 170 Pfam AP2 domain 82 133 IPR001471 GO:0003700|GO:0006355
Pumo3g01501 170 Gene3D AP2/ERF domain 83 144 IPR036955 GO:0003700|GO:0006355
Pumo3g01501 170 ProSiteProfiles AP2/ERF domain profile. 83 141 IPR001471 GO:0003700|GO:0006355
Pumo3g01501 170 MobiDBLite consensus disorder prediction 146 170 - -
Pumo3g01501 170 PRINTS Ethylene responsive element binding protein signature 84 95 IPR001471 GO:0003700|GO:0006355
Pumo3g01501 170 PRINTS Ethylene responsive element binding protein signature 123 143 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01501 Pumo-Chr3 23464915 23465727 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01501 1 164 AP2-EREBP Transcription Factor Family AT2G44840 50.000 3.20e-50 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pumo3g01501 AP2 2e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01501 K09286 K13432 gmx:102664672 275.404