Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01487 ATGAGTTCATCTAACCAATTGAACCAGATCAGCAGCAGGTTTCTAGCAAATAAGCCAAGGAATGGTGTTAATGTGCAGGGAGACATCTTCAGAATTGATGGAAACAGTACAACATTTGTGATGAACTATGGACGTTGGTTGGAAAAACATAACAGACTTATTTCTGAGATACGGAGTGCTTTGAATGATGAAGTTCTTGATGACAAACTAGTGTTTCTTATAGACATAGTCATGAAGCACTATTTTGAACTCTTCGAGATGAAAACAAGTGCTACAAATTTAGATGTCGTCAATGTTGCTTCTGCTATTTGGTGCACAACAGCTGAACGCAATTTGTGGTGGATTGGAGGCTTTCGCCCTTCTCAACTGCTTCAGGTTATTCTGCCTCAACTTCAACATTCGTGTTCCCAGCAACAACTTTCTGATATTTATAATTTTGTACAATCCTGTCAACAAGCAGAAGATGCTCTTGCACAAGGCATGGAAAAACTCCACCAAATCCTTGATAAAGCAACAGCAGCAGATCATGTTCGGCAGCAATTCTTGCATCAATTATCTGGTCTCCTTACAGTTTGTCAGTATGCTGAATTCTTACTTGCCTTCGGCGAACGCCTCTATAACCCCCACCCTTGGAGCTCACTTTGA 645 0.4078 MSSSNQLNQISSRFLANKPRNGVNVQGDIFRIDGNSTTFVMNYGRWLEKHNRLISEIRSALNDEVLDDKLVFLIDIVMKHYFELFEMKTSATNLDVVNVASAIWCTTAERNLWWIGGFRPSQLLQVILPQLQHSCSQQQLSDIYNFVQSCQQAEDALAQGMEKLHQILDKATAADHVRQQFLHQLSGLLTVCQYAEFLLAFGERLYNPHPWSSL 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01487 214 PANTHER TRANSCRIPTION FACTOR TGA9 173 212 - -
Pumo3g01487 214 ProSiteProfiles DOG1 domain profile. 36 214 IPR025422 GO:0006351|GO:0043565
Pumo3g01487 214 Pfam Seed dormancy control 54 128 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01487 Pumo-Chr3 23345846 23348304 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01487 21 203 Calmodulin-binding Proteins AT5G10030 42.523 2.34e-48 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01487 K14431 - gmx:100777211 337.035