Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01473 ATGGGAATTGCAGTGGCAGGTGTTGATTTGCTGAGTGAAAAAGCGGCGATGATGAGAGAGTCTCTGCAGAAGAGTCAAACCATCACAGACAACGTCGTCACCATTCTCGGTTCCTTCGACCACCGTCTCTCCGCCCTCGAAACCGCCATGCGTCCAACTCAGATTAGGACTCACTCTATTAGGAAGGCTCATGAGAATATTGATAGGACTTTGAAGGCTGCTGAGGTTATATTGGCTCACTTCGATCAATATCGTCAGGCAGAGGCAAAAATACTTAAAGGGCCACATGAAGACTTGGAAAACTATCTTGAAGCTATTGATAAGTTGAGAAGCAACATTCAGTTTTTTGGCAGTAAGAATGGTTTTAAGAGTAGTGATGGCATTGTCGTCCATGCTAATAATTTGCTAGCTAAGGCTATTTCGAAGCTAGAAGACGAGTTTAGGCAGTTATTATTATCTTACAGCAAACCTGTGGAACCTGAGCGCCTCTTTGACTGCCTTCCAAACTCAATGCGACCTTCATCACCTGGCCATGAGGGTGATCCTAGTGGCAAGAATCACCATTCTGAGTCTCACAACAATAATGCTGATGCTGTTGTATACACACCTCCCGCTCTTATACCGCCAAGATTTTTGCCACTGCTACATGATTTAGCTCAGCAAATGGTTGAAGCTGGTCACCAACAACAGTTACTCAAAATATACAGGGATGCCCGTTCTAATGTATTGGAAGAGAGCCTCCAAAAACTTGGAGTGGAGAAACTCAACAAAGATGATGTTCAAAAGCTGCCGTGGGAGATTTTGGAAGCCAAAATTGGAAACTGGATTCATTTCATGCGTATAGCAGTGAAATTGTTGTTTGCTGGAGAGAGGAAAGTTTGTGATCAGATATTTGAAGGCTTTGATTCGCTCAGTGAACAGTGCTTTGCTGATGTGACTACAAACAGTGTCTCTATGCTACTCAGTTTTGGAGAAGCAATTGCCAAAAGCAAGAGATCCCCAGAAAAGTTATTTGTACTTTTGGACATGTATGAAATAATGCACGAACTTCATTCAGAGATTGAAACTCTTTTTAAAGGCAAAGCTTGCTCAGGAATAAGAGAAGCTGCAACTGGGTTGACAAAACGACTTGCGCAAACAGCCCAGGAGACCTTTGGAGATTTTGAAGAGGCAGTTGAGAAAGATGCTACGAAGACTGCAGTAACAGATGGAACTGTCCATCCTTTGACAAGCTATGTAATTAACTATGTGAAGTTTTTATTTGACTATCAATCCACCTTGAAGCAACTTTTTCAGGAATTTGAAGGTGGTGATGATTCTTCACAGCTAGCATCCGTAACAGTGCGAATAATGCAAGCTTTGCAAACCAATTTAGATGGGAAATCAAAGCAGTATAAAGACCTTGCATTGACACATCTTTTCCTCATGAACAATATTCATTATATTGTCAGATCGGTTCGGAGGTCTGAAGCCAAGGATTTGCTGGGGGATGATTGGGTACAACGACATAGGAGGATTGTGCAGCAGCATGCAAATCAATACAAAAGAAATGCTTGGGCAAAGATTCTTCAGTGCCTATCTATTCAGGGCCTTACTTCATCCGGCGGTGGGAGTGGTACTGCTGGTGGTGATGGTGGAACTGGAAGCAGTAGTGGTGCTTCAAGAGCAATTGTTAAAGACAGGTTTAAGTCATTCAATATTATGTTTGAGGAACTCCATCAGAAACAATCTCAATGGACAGTTCCTGACACCGAATTGCGAGAGTCTCTTAGGCTTGCAGTTGCTGAAGTCTTGTTGCCTGCCTATAGATCGTTTGTCAAACGTTTTGGGCCTCTAGTGGAGAGTGGAAAGAATCCTCAGAAGTACATCAAATACTCAGCAGAAGATCTAGACCGAATGTTGGGTGAATTTTTTGAAGGAAAAAACATGAGTGAAACCAAGCGGTAG 1947 0.4258 MGIAVAGVDLLSEKAAMMRESLQKSQTITDNVVTILGSFDHRLSALETAMRPTQIRTHSIRKAHENIDRTLKAAEVILAHFDQYRQAEAKILKGPHEDLENYLEAIDKLRSNIQFFGSKNGFKSSDGIVVHANNLLAKAISKLEDEFRQLLLSYSKPVEPERLFDCLPNSMRPSSPGHEGDPSGKNHHSESHNNNADAVVYTPPALIPPRFLPLLHDLAQQMVEAGHQQQLLKIYRDARSNVLEESLQKLGVEKLNKDDVQKLPWEILEAKIGNWIHFMRIAVKLLFAGERKVCDQIFEGFDSLSEQCFADVTTNSVSMLLSFGEAIAKSKRSPEKLFVLLDMYEIMHELHSEIETLFKGKACSGIREAATGLTKRLAQTAQETFGDFEEAVEKDATKTAVTDGTVHPLTSYVINYVKFLFDYQSTLKQLFQEFEGGDDSSQLASVTVRIMQALQTNLDGKSKQYKDLALTHLFLMNNIHYIVRSVRRSEAKDLLGDDWVQRHRRIVQQHANQYKRNAWAKILQCLSIQGLTSSGGGSGTAGGDGGTGSSSGASRAIVKDRFKSFNIMFEELHQKQSQWTVPDTELRESLRLAVAEVLLPAYRSFVKRFGPLVESGKNPQKYIKYSAEDLDRMLGEFFEGKNMSETKR 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01473 648 Gene3D Exocyst complex component Exo70 75 648 - -
Pumo3g01473 648 MobiDBLite consensus disorder prediction 165 195 - -
Pumo3g01473 648 Pfam Exo70 exocyst complex subunit 274 635 IPR046364 GO:0000145|GO:0005546|GO:0006887
Pumo3g01473 648 PANTHER EXOCYST COMPLEX PROTEIN EXO70 58 640 IPR004140 GO:0000145|GO:0006887
Pumo3g01473 648 SUPERFAMILY Cullin repeat-like 77 639 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01473 Pumo-Chr3 23258071 23268244 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01473 8 648 EXO70 exocyst subunit family AT5G03540 76.347 0.0 998
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01473 K07195 - gmx:100813987 1214.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g01473 3 23258071 23268244 Pumo3g01473 3 23258071 23268244 ECH