Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01448 ATGTCAGGAGAGCAAATCTTGTCATCCAATGAAGAAGAATATAATAAATTTCAGCCTCCATTTGGTAACAGGAGTGGCTACAATGCAAGAACAGGCATCTTTCACTCTCTAGTTAAGCTTGGCACAAAGCATGAAATCCCAACAAAGCCTGACCTTAACACTGCCAATTTTGTGCTGTCACAGTTCCCACAAGCACACCTTGCTGAGACCAGAATTGCATTCATTGATTCAGGTACTCGTAGGAGTGTAAGCTATGGTGAGCTAAAAAGGTCTGTTTACTCCCTTGCATCAGCTTTGTTCCATGGACTTGAGATTAGGAAAGGTGATGTGGTATTTCTATTGTCACCAAACTCAACATTGTACTCAGCCATATGCCTAGCTGTGTTATCAGTTGGAGCAGTTCTGACCACTGCCAACCCCATCAACACTGCATCAGAAATTGCGAAGCAAGTGCGTGATTCAGGTGCTAAACTAGCCATCTCAGCACCTGAGGAGCTACACAAATTGGTCCCAACTGGGGTTCCTACAATTCTCACTTCTCGTACTTCTGATGGCAACATGTTATCAGTTGAAGAGTTAATAGAAGGCTGTTGTACTTCACCAGAGTTGCCTCAAGTTCCTGTGGCACAATCAGACATTGCTGCTATACTTTACTCTTCAGGAACCACAGGGGTAAGCAAAGGTGTGGTTTTGACACATGCAAATCTCATTTCCATAATGAGACTACTCTTATGGTCTGCTGATGTCAGTGGATCCCAAGATGATGTTTTCTTGGCCTTCATTCCAATGTTTCACATCTATGGACTGGTGTTCTTTGGATTAGGATTGTTGTGTGTTGGTGTTACAACAGTTTTGATGCAGAAATATGACTTCCAAGGTATGCTTGATGCAATCCAGAAGCACAAGGTTAACAACGTACCGGCAGTGCCACCAGTGATCCTTGCACTAGTAAAACATGCAAAAAAAGCTAGGTGTGACTTGTCCAGCCTAAGAAGGGTGGGGTCAGGTGCTGCACCTTTGAGCAAGGAAGTGATACAGGAGTTTAGGAAGATGTTTCCTTGGGTTGAACTTAGGCAAGGTTATGGGCTAACTGAAAGTAGTGGTGGAGCAACATTTTTTGCCTCAGATAAAGATGCTAAAGCTCATCCAGATTCATGTGGAAAGTTGATTCCAACTTTTTGTGCAAAAGTAGTAGACATTGAAACGGGGAAGCCATTGCCTCCTCATAAAGAAGGAGAGTTATGGTTCAAAAGTTCTACTATTATGAAAGGATATCTAGGAAATTTGGAGGCAACAAGTGCAACAATTGATTCAGAAGGGTGGTTGAAGACCGTGGGAAAACCAATTGATTCACTTTGGCCATAA 1365 0.4278 MSGEQILSSNEEEYNKFQPPFGNRSGYNARTGIFHSLVKLGTKHEIPTKPDLNTANFVLSQFPQAHLAETRIAFIDSGTRRSVSYGELKRSVYSLASALFHGLEIRKGDVVFLLSPNSTLYSAICLAVLSVGAVLTTANPINTASEIAKQVRDSGAKLAISAPEELHKLVPTGVPTILTSRTSDGNMLSVEELIEGCCTSPELPQVPVAQSDIAAILYSSGTTGVSKGVVLTHANLISIMRLLLWSADVSGSQDDVFLAFIPMFHIYGLVFFGLGLLCVGVTTVLMQKYDFQGMLDAIQKHKVNNVPAVPPVILALVKHAKKARCDLSSLRRVGSGAAPLSKEVIQEFRKMFPWVELRQGYGLTESSGGATFFASDKDAKAHPDSCGKLIPTFCAKVVDIETGKPLPPHKEGELWFKSSTIMKGYLGNLEATSATIDSEGWLKTVGKPIDSLWP 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01448 454 Pfam AMP-binding enzyme 69 444 IPR000873 -
Pumo3g01448 454 Gene3D - 37 445 IPR042099 -
Pumo3g01448 454 ProSitePatterns Putative AMP-binding domain signature. 216 227 IPR020845 -
Pumo3g01448 454 MobiDBLite consensus disorder prediction 1 22 - -
Pumo3g01448 454 SUPERFAMILY Acetyl-CoA synthetase-like 64 444 - -
Pumo3g01448 454 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 29 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01448 Pumo-Chr3 22867828 22870301 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01448 28 444 Monolignol Biosynthesis Gene Families AT1G20510 41.822 7.06e-101 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01448 K10526 - gmx:100796728 795.808