Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01422 ATGTTGGAAATGGAGAAGGATTTTGATTCCAAGCTGAAGATTCAGGGCAATTCCTCCTCTTCCAATGGTGGTGGGAATGTCCAGAGATCCAAAAGCTTTGCTTTTAGGGCTCCCCAGGAGAATTACACCATTCAGGACTTTGAATTGGGCAAGATCTATGGTGTTGGCTCTTATTCTAAGGTTGTGAGGGCAAAGAAGAAGGACACAGGAACTGTGTACGCATTGAAGATCATGGACAAAAAGTTTATTACCAAAGAGAACAAAACAGCTTATGTGAAGTTGGAACGCATTGTGTTAGATCAATTGGATCATCCAGGCATTGTGCGGTTATATTTCACATTTCAAGACTCATTTTCTCTATACATGGCACTTGAATCCTGTGAAGGTGGAGAACTTTTTGATCAAATAACCAGGAAAGGTCGTCTATCAGAGGATGAGGCACGATTCTATGCAGCTGAAGTTGTCGATGCTCTTGAGTACATACATAATTTGGGAGTGATACATCGTGATATTAAGCCAGAGAACTTATTACTTACAGCTGAAGGACATATTAAAATAGCCGATTTTGGGAGTGTGAAGCCTATGCAGGATAGCCAAATAACTGTCCTTCCAAATGCAGCATCAGATGACAAAGCCTGCACTTTTGTGGGAACAGCAGCTTATGTTCCTCCAGAGGTTCTTAATTCCTCTCCAGCAACTTTTGGAAATGACCTATGGGCACTTGGCTGCACATTATACCAAATGCTTTCTGGAACTTCCCCTTTTAAAGACGCAAGTGAATGGCTTATTTTTCAAAGAATTATAGCAAGAGAACTTAGATTTCCAGATTACTTTTCTGACGAAGCAAGAGACCTTATTGACCGCCTGTTGGATTTGGACCCCAGTAGGAGACCTGGTGCTGGACCTGATGGTTATGCTATTTTAAAAAGGCACCCATTTTTCAAGGGGGTTGACTGGGATAACTTGAGGGCACAAATTCCTCCAAAACTTGCTCCAGAACCTGGGACTCAGTCGCCTGCGGCTGATGATGTTCATGACTCATCGTGGAGTCCTTCTCACATTGGGGATGGTTCTGCAGCTTCAGGTAGACAACCTGATGGTGCTACATCTTCTGAGGGGACTGCCACATAA 1131 0.4315 MLEMEKDFDSKLKIQGNSSSSNGGGNVQRSKSFAFRAPQENYTIQDFELGKIYGVGSYSKVVRAKKKDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGIVRLYFTFQDSFSLYMALESCEGGELFDQITRKGRLSEDEARFYAAEVVDALEYIHNLGVIHRDIKPENLLLTAEGHIKIADFGSVKPMQDSQITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDASEWLIFQRIIARELRFPDYFSDEARDLIDRLLDLDPSRRPGAGPDGYAILKRHPFFKGVDWDNLRAQIPPKLAPEPGTQSPAADDVHDSSWSPSHIGDGSAASGRQPDGATSSEGTAT 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01422 376 FunFam 3-phosphoinositide-dependent protein kinase 2-like 131 329 - -
Pumo3g01422 376 MobiDBLite consensus disorder prediction 341 376 - -
Pumo3g01422 376 FunFam 3-phosphoinositide-dependent protein kinase 2-like 45 130 - -
Pumo3g01422 376 Gene3D Transferase(Phosphotransferase) domain 1 131 333 - -
Pumo3g01422 376 SMART serkin_6 47 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g01422 376 CDD STKc_PDK1 45 314 IPR039046 GO:0004674
Pumo3g01422 376 SUPERFAMILY Protein kinase-like (PK-like) 29 336 IPR011009 -
Pumo3g01422 376 Gene3D Phosphorylase Kinase; domain 1 45 130 - -
Pumo3g01422 376 MobiDBLite consensus disorder prediction 13 27 - -
Pumo3g01422 376 MobiDBLite consensus disorder prediction 326 376 - -
Pumo3g01422 376 MobiDBLite consensus disorder prediction 1 27 - -
Pumo3g01422 376 ProSiteProfiles Protein kinase domain profile. 47 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g01422 376 ProSitePatterns Serine/Threonine protein kinases active-site signature. 166 178 IPR008271 GO:0004672|GO:0006468
Pumo3g01422 376 PANTHER SERINE/THREONINE-PROTEIN KINASE 31 334 - -
Pumo3g01422 376 Pfam Protein kinase domain 49 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01422 Pumo-Chr3 22486688 22492673 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01422 1 376 AGC Kinase Gene Family AT3G10540 81.117 0.0 637
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_PDK1 Pumo3g01422 Pkinase 1.1e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01422 K06276 - gmx:100801891 724.546