Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01396 ATGGCCACTCTTTCCTCCTACGACCACCTCATCTTCACTGCCTTAGCTTTCTTCATATCTTTCCTAATTTTCTTCCTCAAACACAAATCCAAATCCAAAAAATTCAACCTCCCTCCAGGACCCCCCGGGTGGCCTATTGTTGGGAACCTCTTTCAGGTTGCTCGTTCGGGGAAACCTTTCTTCGAGTATGTGAACGATGTGAGACTCAAATACGGCTCAATCTTCACCCTCGAGATGGGGACAAGGACCATGATCATCCTCACCGATGCAAAACTCGTCCACGAGGCCATGATTCAGAAGGGGGCAACCTACGCTACCAGGCCTCCCGAGAATCCCACCAGGACCATCTTCAGTGAAAACAAGTTCACAGTAAATGCAGCAACTTATGGCCCTGTGTGGAAGTCTCTCAGGAGGAACATGGTGCAGAATATGCTCAGCTCCTCCAGGCTCAAGGAGTTTCGCGAAGTTCGGGACAATGCAATGGACAAGCTCATCAACAGGCTCAAGGCTGAAGCTGAGAAGAATAACGGCGTGGTTTGGGTGCTCAAGGATGCCAGGTTTGCTGTTTTTTGCATACTTGTTGCTATGTGTTTTGGTCTCGAGATGGATGAGGAGACGGTGGAGAGAATAGATCAGGTTATGAAGAGTGTTCTCATGACTTTGGACCCCAGAATTGATGACTATCTTCCAATTCTAAGCCCCTTTTTCTCGAAGCAGAGAAAGAAAGCCTTGGAGGTTCGCAGAGAACAGGTTGAGTTCTTGGCCCCAATTATTGAGCAAAGAAGGAGGGCAATTCAAAACCCTGGCTCAGACCACACCGCCACAACGTTTTCCTACCTAGACACACTGTTTGACCTCAAAGTTGAAGGGAAGAAATCAGCACCCTCTGATGCTGAATTGGTGTCACTATGCTCAGAGTTTCTCAACGGTGGCACAGACACAACAGCAACTGCGGTTGAGTGGGGCATAGCACAGCTAATAGCCAACCCTCACGTTCAAGCAAAGCTGTATGAAGAAATTAAGAGGACGGTGGGAGACAAGAAGGTGGATGAAAAGGACGTTGAGAAAATGCCATACCTACATGCTGTGGTGAAGGAGCTTCTGAGAAAGCACCCTCCAACACACTTTGTTCTCACACATGCTGTCACTGAGCCTACCACTTTGGGAGGGTATGACATACCAATTGATGCAAACATTGAGGTGTACACTCCAGCAATTGCTGAGGACCCCAAATATTGGTCAAACCCTGAGAAGTTTGACCCTGAGAGGTTCATCTCTGGTGGTGAGGAAGCAGACATAACTGGGGTCAAAGGGGTCAAGATGATGCCATTTGGGGTTGGCAGAAGGATATGCCCTGGCTTGGCCATGGCCACAGTGCATATTCACCTCATGATAGCTAGGATGGTGCAGGAGTTTGAGTGGGGCTGCATACCCTCCAGACAAGAAGATGGATTTCACTGGCAAGTGGGAGTTCACTGTGGTCATGAAGGAATCTCTAAGAGCAACTATCAAACCAAGAGGAGCAGAAAAAGTGCAGTTGTAAAATTTTGCTGCTTCTGGTTTGTTTTTACAGATAACATAATAGTATTATTATTATTATTATTATATATATACATCATCATCATCATCATCATCATGGTTTGTGGGTAA 1650 0.4673 MATLSSYDHLIFTALAFFISFLIFFLKHKSKSKKFNLPPGPPGWPIVGNLFQVARSGKPFFEYVNDVRLKYGSIFTLEMGTRTMIILTDAKLVHEAMIQKGATYATRPPENPTRTIFSENKFTVNAATYGPVWKSLRRNMVQNMLSSSRLKEFREVRDNAMDKLINRLKAEAEKNNGVVWVLKDARFAVFCILVAMCFGLEMDEETVERIDQVMKSVLMTLDPRIDDYLPILSPFFSKQRKKALEVRREQVEFLAPIIEQRRRAIQNPGSDHTATTFSYLDTLFDLKVEGKKSAPSDAELVSLCSEFLNGGTDTTATAVEWGIAQLIANPHVQAKLYEEIKRTVGDKKVDEKDVEKMPYLHAVVKELLRKHPPTHFVLTHAVTEPTTLGGYDIPIDANIEVYTPAIAEDPKYWSNPEKFDPERFISGGEEADITGVKGVKMMPFGVGRRICPGLAMATVHIHLMIARMVQEFEWGCIPSRQEDGFHWQVGVHCGHEGISKSNYQTKRSRKSAVVKFCCFWFVFTDNIIVLLLLLLYIYIIIIIIIMVCG 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01396 549 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 444 453 IPR017972 GO:0005506|GO:0016705
Pumo3g01396 549 CDD CYP77_89 70 478 - -
Pumo3g01396 549 Pfam Cytochrome P450 38 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g01396 549 SUPERFAMILY Cytochrome P450 38 481 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g01396 549 Gene3D Cytochrome P450 30 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g01396 549 PRINTS E-class P450 group I signature 451 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g01396 549 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g01396 549 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g01396 549 PRINTS E-class P450 group I signature 361 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g01396 549 PRINTS E-class P450 group I signature 188 206 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g01396 549 PRINTS E-class P450 group I signature 441 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g01396 549 PRINTS E-class P450 group I signature 92 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g01396 549 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g01396 549 PRINTS E-class P450 group I signature 402 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g01396 549 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 15 475 - -
Pumo3g01396 549 PRINTS P450 superfamily signature 442 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g01396 549 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g01396 549 PRINTS P450 superfamily signature 451 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g01396 549 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g01396 549 FunFam Cytochrome P450 family protein 31 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01396 Pumo-Chr3 22049447 22051678 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01396 27 485 Cytochrome P450 AT3G10570 69.499 0.0 680
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01396 K21995 - gmx:100795510 888.641