Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01389 ATGGAGGAAGGGGTGGATGCAGATGAAGTGGTGAGGTCATTGAGCAGCTTGAGGATAAGCATAGGGTCTTTGAGCAGGAGGAGTTGGGTGTCAGCAAGTGTTTCTGAGATGTGGGGTGCTGGACATGGTGGGGATGTTTTTGAGAGGAGCAATAGAGTGGATGCTGATGATGAAGAGGAGCTCAAGTGGGCAGCCATAGAGAGGCTTCCAACATTTGAGAGGCTAAGGAAAAGCATAGTCAAAAGGGTTTTGGAAGAGAGTGGAAGGTTCAATTATGAAGAGATTGATATATCCAATCTTGGTTTTGAGGACAAGAAGAAACTACTTCATGCCATTCTAAGGAATGTTGAAGCTGACAATGAGAGGTTTCTGCGTAGGATGAGGGAGAGGATTGATAGGGTCGCTATAGAGATTCCAAAGGTTGAAGTCCGATTTGAGCATTTGTTTGTAGAAGGAGATGCATTTAATGGAACCAGGGCACTGCCAACCTTAGTGAACTCCACCATGAATGCGATAGAGAGAATTCTTGGATCAATTAATCTTCTTCCATCAAAGAAAAGTGTTATCAAGATACTCCAAGATGTTAGTGGAATTGTCAAGCCTGCAAGATTGACCTTGCTTTTGGGGCCTCCAAGATCAGGAAAAACTACACTGCTGCAAGCACTTGCTGGGAAACTGGACAGGGATTTAAGGGTATCCGGAAGAGTAACTTACTGTGGTCATGAGTTATCAGAATTTGTTCCTCAAAGAACGTGTGCTTATATTAGTCAGCATAATCTTCATCATGGAGAGATGACAGTCAGAGAGACGCTGGACTTTTCTGGACGCTGCTTGGGAGTTGGAACAAGGCATGAGCTATTACTAGAACTGATAAAGCGAGAGAAGCAAGCAGGACTCAAACCAGATCCAGAGATAGATGCTTTCATGAAAGCCACAGCAGTGGAAGGTCAAGAAACAAGTCTCATTACAGATTATGTTCTCAAGGTTCTTGGATTGGAAATATGTGCTGATACTTTGGTGGGAGATGAGATGAGGAGGGGAATATCTGGTGGAGAAAAAAAGAGGTTAACCACTGGTGAGATGTTGGTAGGACCTGCAAAAGTTTTCTTAATGGATGAGATTTCAACTGGTTTGGATAGTTCCACAACCTTCCAAATTGTCAAGTTCTTGAGGCAACTAGTGCATGTCATGGATGTTACAATGATAATCTCTCTTTTACAACCTGCACCAGAAACATTTGACCTTTTTGATGAGATTATCTTGCTTTCAGAAGGTCACATTATCTACCAAGGTCCACGTGAGAATGTTCTCAATTTTTTTGAGAGTGTAGGCTTCAAATGCCCCGAAAGGAAAGGAATTGCAGACTTCTTACAAGAGGTTACTTCCAGAAAGGACCAAGAACAGTACTGGTTCGCAAGGGACAAACCATACCGTTATATCAGTGTGCCTGAGTTTGTAGCTCACTTCAACAATTTTGGCATTGGCCAACAACTTTCCCAAGATCTTCAGGTTCCTTATGACCGTGCCAAAACTCATCCTGCTGCATTGGTTAAAGATAAATATGGGATCTCAAAACTAGAACTCTTCAAGGCATGCTTTGCAAGAGAGTGGCTACTTATCAAGCGCAGTGCTTTTATATACATATTTAAGACTACTCAGATTATGATAATGTCTTTGATTACTATGACAGTGTTTTTTAGGACAGAAATGAGAAGTGGTCATCTTGAAGATGGGAGAAAATTTTATGGTGCACTGTTCTTTAGCCTCACTAATATAATGTTCAATGGAATGGCTGAGCTTTCATTGACTATTTTTAGACTTCCCGTTTTCTTCAAGCAGAGAGATTCATTATTTTTTCCAGCATGGGCTTTTGCAATTCCCATATGGATCTTTCGAATTCCTCTTTCTTTTGTGGAGTCAGGATTATGGGTTGTCCTTACTTATTACACCGTAGGGTATGCTCCAGCTCCAAACATTGAAATGGCAGAAAAAAACACCCGAGAGAGTTCAACTTCCAAAGAAGACACTACAAGAATAAAGAGGGGAATGGTGTTACCCTTTAAGCCTCTATCACTTGCTTTTGATCACGTGAATTACTACGTCGATATGCCAACTGAAATGGAAAAACATGGAGTTGAAGGGAGTCGGCTTCAACTACTAAGAGATGTCAGCGGTGCTTTCAGGCCTGGAGTACTAACAGCATTAGTAGGTGTAACTGGTGCTGGAAAAACCACATTGATGGATGTTCTAGCTGGAAGAAAAACTGGTGGTTATATTGAAGGAAGTATCAGCATATCTGGTTACCCAAAAAAACAAGCAACTTTTGCTCGGATTAGTGGATATTGTGAACAAAATGATATCCATTCTCCACGTATCACAGTGTACGAATCTATTCTGTTTTCTGCTTGGCTGCGTCTTGGTAAGGAGGTCAAGAGAGAAATAAGGAAGATGTTTGTTGAGGAAGTTATGAACCTCGTTGAGCTACATCCAGTGAGAGATTTTCTAGTAGGCCTTCCTGGCATAGATGGTTTATCAACTGAACAAAGAAAGAGACTCACCATTGCTGTAGAATTGGTTGCCAATCCTTCTATCATCTTTATGGATGAGCCAACCTCCGGCCTTGACGCTAGAGCTGCAGCAATTGTTATGCGTACTGTCAGAAATACAGCGGATACAGGGAGAACTATTGTCTGCACAATTCATCAACCAAGCATTGACTTATTTGAAGCTTTTGATGAGCTGCTTCTGATGAAGAGAGGAGGACAAATCATATATAATGGTCCCTTAGGTCAACAATCTCAGAAGCTTATAGAGTACTTTGAGGCTATTCCGGGAGTTACCAGAATCAAAGATGGTTATAACCCTGCCACATGGGTTTTGGAGATCAGTACTCCAGCAGTTGAGAGTCAGCTTAGAGTAGACTTTGCAGAATTGTACACTAAGTCAGAATTGTATCAGAGGAATCAAGAACTTATTAAAGAGCTAAGCACGCCTTTAGAGGGAACAAAGGACCTTGATTTCCCTACTAAATACTCCCTTTCCTTTTTTACTCAATGTAAAGCTTGCTTCTGGAAACAGCACTTGTCCTACTGGAGGAATCCACAGTATAATGGCATCCGGTTCTTCATGGCAATAACTATAGGTGTTATTTTTGGACTCATTTTCTGGAAAAAAGGAAATAAAACAGATACGGAGCAAGATCTTATGAATATAATGGGGGCTATTTTTGCTGCTGTTTTCTTTCTTGGAGGCTCCAACACTTCCAGTGTTCAACCCATAGTTGCAATAGAAAGAACAGTCTTCTACCGTGAAAGAGCAGCTGGAATGTACTCAGCTCTACCATATGCAATTGCTCAGGTGGCAATAGAATGTATTTATGTTGCAATCCAGACATTTACCTTTAGTCTTATCCTTTACTCAATGATGGGGTTCCTTTGGCAAGTTGACAAGTTCTTGTGGTTCTACTACTTCATGTTCATTTCATTTGTCTACTTCACGCTTTATGGCATGATGACTGCGGCTCTGACACCTAACCCCCAAATTGCTGCAATTGCTATGGCCTTCTTTCTAGTGTTTTGGAACGTATTCTCAGGTTTTGTTATCCAAAAATCGCAAATTCCAATATGGTGGCGGTGGTATTACTGGGCATGTCCAACTGCATGGAGTCTATATGGCCTAGTGACATCCCAGGTGGGTGACAAAGATACTCCAATTCTGGTACCTGGAACGAAATCAATGTCAGTAAAAGCATTCCTTGAAGAACAGTTCGACTATGAATATGGCTTCCTTGGAGTTGTTGCTGTGGCTCATATTGCTTTTGTTGCATTGTTTCTTTTTGTTTTTGCATATGGTATCAAGGTCTTTAATTTCCAGAAGAGATAA 3882 0.4124 MEEGVDADEVVRSLSSLRISIGSLSRRSWVSASVSEMWGAGHGGDVFERSNRVDADDEEELKWAAIERLPTFERLRKSIVKRVLEESGRFNYEEIDISNLGFEDKKKLLHAILRNVEADNERFLRRMRERIDRVAIEIPKVEVRFEHLFVEGDAFNGTRALPTLVNSTMNAIERILGSINLLPSKKSVIKILQDVSGIVKPARLTLLLGPPRSGKTTLLQALAGKLDRDLRVSGRVTYCGHELSEFVPQRTCAYISQHNLHHGEMTVRETLDFSGRCLGVGTRHELLLELIKREKQAGLKPDPEIDAFMKATAVEGQETSLITDYVLKVLGLEICADTLVGDEMRRGISGGEKKRLTTGEMLVGPAKVFLMDEISTGLDSSTTFQIVKFLRQLVHVMDVTMIISLLQPAPETFDLFDEIILLSEGHIIYQGPRENVLNFFESVGFKCPERKGIADFLQEVTSRKDQEQYWFARDKPYRYISVPEFVAHFNNFGIGQQLSQDLQVPYDRAKTHPAALVKDKYGISKLELFKACFAREWLLIKRSAFIYIFKTTQIMIMSLITMTVFFRTEMRSGHLEDGRKFYGALFFSLTNIMFNGMAELSLTIFRLPVFFKQRDSLFFPAWAFAIPIWIFRIPLSFVESGLWVVLTYYTVGYAPAPNIEMAEKNTRESSTSKEDTTRIKRGMVLPFKPLSLAFDHVNYYVDMPTEMEKHGVEGSRLQLLRDVSGAFRPGVLTALVGVTGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQATFARISGYCEQNDIHSPRITVYESILFSAWLRLGKEVKREIRKMFVEEVMNLVELHPVRDFLVGLPGIDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTADTGRTIVCTIHQPSIDLFEAFDELLLMKRGGQIIYNGPLGQQSQKLIEYFEAIPGVTRIKDGYNPATWVLEISTPAVESQLRVDFAELYTKSELYQRNQELIKELSTPLEGTKDLDFPTKYSLSFFTQCKACFWKQHLSYWRNPQYNGIRFFMAITIGVIFGLIFWKKGNKTDTEQDLMNIMGAIFAAVFFLGGSNTSSVQPIVAIERTVFYRERAAGMYSALPYAIAQVAIECIYVAIQTFTFSLILYSMMGFLWQVDKFLWFYYFMFISFVYFTLYGMMTAALTPNPQIAAIAMAFFLVFWNVFSGFVIQKSQIPIWWRWYYWACPTAWSLYGLVTSQVGDKDTPILVPGTKSMSVKAFLEEQFDYEYGFLGVVAVAHIAFVALFLFVFAYGIKVFNFQKR 1293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01389 1293 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 716 931 IPR027417 -
Pumo3g01389 1293 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 692 945 IPR003439 GO:0005524
Pumo3g01389 1293 FunFam ABC transporter G family member 34 179 483 - -
Pumo3g01389 1293 Pfam ABC-2 type transporter 901 970 IPR043926 GO:0140359
Pumo3g01389 1293 Pfam ABC-2 type transporter 407 458 IPR043926 GO:0140359
Pumo3g01389 1293 Pfam ABC-2 type transporter 1017 1229 IPR013525 GO:0016020|GO:0140359
Pumo3g01389 1293 Pfam ABC-2 type transporter 528 655 IPR013525 GO:0016020|GO:0140359
Pumo3g01389 1293 FunFam ABC transporter G family member 40 706 936 - -
Pumo3g01389 1293 Pfam ABC transporter 192 374 IPR003439 GO:0005524
Pumo3g01389 1293 Gene3D - 706 942 IPR027417 -
Pumo3g01389 1293 Pfam ABC-transporter N-terminal 105 166 IPR029481 -
Pumo3g01389 1293 Pfam ABC transporter 720 872 IPR003439 GO:0005524
Pumo3g01389 1293 CDD ABCG_PDR_domain2 689 927 IPR034003 -
Pumo3g01389 1293 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 176 449 IPR003439 GO:0005524
Pumo3g01389 1293 PANTHER PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 662 1293 - -
Pumo3g01389 1293 Gene3D - 180 479 IPR027417 -
Pumo3g01389 1293 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 190 448 IPR027417 -
Pumo3g01389 1293 SMART AAA_5 729 921 IPR003593 GO:0016887
Pumo3g01389 1293 SMART AAA_5 201 426 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01389 Pumo-Chr3 21929187 21948057 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01389 717 904 Calmodulin-binding Proteins AT2G36910 27.500 5.16e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01389 K08711 - gmx:100786666 1245.72