Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01369 ATGGTCCTGTATATAAGCCCCATGAGAGGAGGAAAACCTGAGAAAACTAATTGGGTTATGCATCAATATCATCTAGGAACAGGAGAGGATGAAAAGGATGGAGAGTATGTTATCTCTAAAGTGTTTTACCAGCAGCAGCAAGTTAAATTTGGTGAAAAAGATGACCAGGATATTCCTGAAATCACTGAAGCAACTACGGTTAAAGTGGATCCAGTCACTCCCAAATCTGTGACTCCTGAACCTCCTCGTATTGAAAAGCGATGCTCAAATCTAGACCTAGGACATGAATCACATCACATTCCTCAGCATCCTCAGATGGATTGTGTAGATGACCTACAGGCTGATTGTGAAGATCTTGCAAAAGATGATCTATTGATAGTAGAAACTCAAAATAATGAAGGGATAGATAATATAGAAAACAATGCTGAGGAAGACTCACAATGGTGGGATAGTGAGTCTCAGAATCTGTTGAGTTCACAACAACTTGTCGAAGCATTGTTCTTGTGTGATGATCTCCTTCAAAGCCAGTCCCCCAAGAGGGATGGGGAAAGTGACAAGAAACGACCCAGCCTTTCTGTTTATGCTGATCTAGGACCAGAGCATCTGAAGAAAGATATCGAAGAGTGTCAAAATCTTGTCCTTGACACTGCAAATGTAGAGCCTGAGACACCACCTTCAGAATTTCGACTAAGTCAGCTGGATTTCGGTTCACAGGATAGCTTTGTTTCCTGGTGTGCCAGCAAAGCAATTGACTAA 756 0.418 MVLYISPMRGGKPEKTNWVMHQYHLGTGEDEKDGEYVISKVFYQQQQVKFGEKDDQDIPEITEATTVKVDPVTPKSVTPEPPRIEKRCSNLDLGHESHHIPQHPQMDCVDDLQADCEDLAKDDLLIVETQNNEGIDNIENNAEEDSQWWDSESQNLLSSQQLVEALFLCDDLLQSQSPKRDGESDKKRPSLSVYADLGPEHLKKDIEECQNLVLDTANVEPETPPSEFRLSQLDFGSQDSFVSWCASKAID 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01369 251 ProSiteProfiles NAC domain profile. 1 44 IPR003441 GO:0003677|GO:0006355
Pumo3g01369 251 Gene3D NAC domain 1 49 IPR036093 GO:0003677|GO:0006355
Pumo3g01369 251 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 1 210 IPR044799 GO:0003700
Pumo3g01369 251 SUPERFAMILY NAC domain 9 44 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01369 Pumo-Chr3 21690703 21692241 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01369 1 51 NAC Transcription Factor Family AT1G28470 68.627 3.84e-16 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01369 - - gmx:100787702 466.463