Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01328 ATGAATAACTCTGTTTCAGACAACAGTTTCATCATTGAGAGTGATGAAGAAGATGAGGAGAAGGATTTGAACAAAGGTGGAGGTGATGGTAATGATTCTGATTCTTCCAATTACTCAAATGAAAACCCTCCACAGAGAAAGCCCAGTTCTTACAACATCTCATGGCCTCAGAGTTACAGGCAGTCTATTGATCTATATAGTAGTGTGCCATCACCAAACATTGGATTTTTGGGCACACCCTCATTGTCAAGACTAAGCAGTTCTTTCCTTTCTACATCACTAACAAGGAGGCACACTCCTGAAGCACTTCCTTCAGTGACAAAGCCTCTGATACAAGACACAGAAGATGAGCAGCATCAGAGACGTAGCTCTCACACCTTGCTTCCTCCTCTTCCTTCTAGAAGGTCTTCTTTGATTAAGAAGGATTCCAAGGTTGCTCATCATGAAGTTCCCTCTCGCCACTGCTCTTTTGGACAAGCTGTGCTTAATGGCATAAATGTTCTTTGTGGTGTTGGAATCCTTTCTACCCCTTATGCTGCCAAAGTAGGTGGATGGCTTGGGCTCTCTATCTTGTTCATTTTTGCAATTATTTCATTTTATACTGGTCTGCTCTTGCGTTCCTGCTTGGACAGTGAACCTGAGCTTGAGACATACCCTGATATTGGCCAAGCTGCTTTTGGTACTACTGGACGTATTGCCATTTCAATAGTATTATACGTGGAATTATATGCTTGTTGCATTGAGTATATAATATTGGAGGGCGACAACTTGTCTTCCTTATTTCCAAGTGCACACTTGAATTTGGGTGGAATTGAACTGAATTCGCATACACTGTTTGCTGTGATTACTGCCTTGGCTGTTCTTCCTACTGTTTGGCTCCGTGACCTAAGCGTTCTCAGTTACATATCCGCTGGTGGAGTTGTTGCATCAATTTTAGTGGTTCTTTGCTTGTTTTGGGTTGGCGTCGAGGACGTAGGCTTTCATAGCAAAGGGACCACACTCAATCTTGGAACTCTTCCTGTTGCTATTGGTCTTTATGGTTACTGCTACTCTGGACATGCCGTGTTCCCGAACATTTATACATCCATGGCAAATCCAAACCAATTCCCTGGAGTGCTCTTAGCATGTTTTGGTATTTGTACCTTATTGTATGCTGGAGCTGCTGTTATGGGATACACAATGTTTGGAGAAGCTATACTGTCTCAGTTCACTCTTAACATGCCTCAAGAATTGGTAGCCACCAAGATTGCTGTCTGGACTACGGTGGTTAATCCATTTACCAAGTATGCATTGACTATATCTCCAGTGGCAATGAGTCTGGAGGAGTTGATACCACCAAACCATGCCAAGTCTTATCTATATTCCATCTTCATCAGAACAGGGTTGGTACTTTCTACCCTGGTTATTGGTCTCTCAGTTCCCTTTTTTGGTCTGGTGATGTCATTGATTGGATCATTACTCACAATGCTTGTTACTTTGATACTACCCTGTGCTTGTTTCCTAAGAATCTTGCGGGGCAAAGTGACACGAGCACAGGCAGCACTTTGCATTACAATTATCACAGTAGGTGTTGTATGTTCTGCTTTTGGAACATACTCAGCCCTCGCCGAGATTGTGAAGAGTTTGAGGGGATGA 1635 0.4294 MNNSVSDNSFIIESDEEDEEKDLNKGGGDGNDSDSSNYSNENPPQRKPSSYNISWPQSYRQSIDLYSSVPSPNIGFLGTPSLSRLSSSFLSTSLTRRHTPEALPSVTKPLIQDTEDEQHQRRSSHTLLPPLPSRRSSLIKKDSKVAHHEVPSRHCSFGQAVLNGINVLCGVGILSTPYAAKVGGWLGLSILFIFAIISFYTGLLLRSCLDSEPELETYPDIGQAAFGTTGRIAISIVLYVELYACCIEYIILEGDNLSSLFPSAHLNLGGIELNSHTLFAVITALAVLPTVWLRDLSVLSYISAGGVVASILVVLCLFWVGVEDVGFHSKGTTLNLGTLPVAIGLYGYCYSGHAVFPNIYTSMANPNQFPGVLLACFGICTLLYAGAAVMGYTMFGEAILSQFTLNMPQELVATKIAVWTTVVNPFTKYALTISPVAMSLEELIPPNHAKSYLYSIFIRTGLVLSTLVIGLSVPFFGLVMSLIGSLLTMLVTLILPCACFLRILRGKVTRAQAALCITIITVGVVCSAFGTYSALAEIVKSLRG 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01328 544 PANTHER OS05G0424000 PROTEIN-RELATED 164 524 - -
Pumo3g01328 544 MobiDBLite consensus disorder prediction 1 53 - -
Pumo3g01328 544 Pfam Transmembrane amino acid transporter protein 155 533 IPR013057 -
Pumo3g01328 544 MobiDBLite consensus disorder prediction 29 53 - -
Pumo3g01328 544 MobiDBLite consensus disorder prediction 100 135 - -
Pumo3g01328 544 FunFam Amino acid transporter AVT1A 153 541 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01328 Pumo-Chr3 21038172 21046407 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01328 1 477 Amino Acid or Auxin Permease AAAP Family AT2G39130 71.488 0.0 706
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01328 K15015 - gmx:100775840 967.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g01328 3 21038172 21046407 Pumo3g01328 3 21038172 21046407 ECH