Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01324 ATGGCGGGTCCCACCACTACTAGTTCACTTCTCATTTTCTCTTTTTCTCTTTTCTATTGCTATGTTCCCATCATGCCATTCCCTGAAGCAGAAGCTCAAAACCCTTTTGTTTTAGAGACTCAACAAAAACCTCTGTTGCAGTCATTTTCAACGTTTGTGGTCACTCACTCCAACTTCAACATGTGTAGGTGGAGCACCAACTTAAAGCATTTGTGGGTGCCCATTGTGGTATTGAGCTTGTTCCTTGGGATGATGCAGTTGCAGTGCCAACAAGTGAATGACTATGACCAAATTGATAACCCTGCTGTTCTTCCCCTCGTTACTCAGCTTGTCTATAGACAAATCTCCAATTTGACATCAATACTCAGTCAGCAAATAAGCAAAGACTCCACTTTCTGTGTCAAAGATCCGGATGCTGATTGGAATCAAGCATTTAATTTTTCATCTGATTTGGGCTTCTTGGCGTCTTGCATTAAGAAGACTAGAGGAGATATTGCAAAACGATTGTGTACAGCAGCAGAAGTGAAGTTTTTCTTGAATAGTTTGTTGGGGAATTCTGTAAGTGCCAATTATTTAAAGCCTAACAAGAACTGCAATTTAACCTCATGGGTCTCCGGTTGTGAGCCAGGATGGGCCTGTAGTGATCACTCAAGCCAGAAGGTTGACCTTAAAAATTCAAAGGAGATACCTGCAAGAACTTCAAACTGTCAAGCATGTTGTGAAGGCTTCTTTTGTCCTCATGGTATCACATGCATGATACCATGCCCTTTAGGTTCCTATTGCCCTCTTGCTACGCTCAATAAAACAACTGGCGTATGTGAACCATATCTTTATCAGCTTCCTCCAATGCAACCAAACCATACCTGTGGTGGAGCAAATGTTTGGGCTGACGTTCGTAGCAGTAGTGAGATATTTTGCTCAGCGGGATCATATTGTCCAACAACCACCAAAAGAATTCCTTGCAGTAGTGGACATTACTGCAGGATGGGTTCCACATCTGAGAAAAGATGCTTCAAGTTGAGTTCTTGTAATTCAAACACAGCAACCCAAAATATGCAAGCATATGGAATTATGCTCATTGCTGCTTTGAGTACTTTGCTACTCATTATTTACAATTGTTCTGACCAAGTTCTCACTACTAGGGAAAGAAGAGTGGCCAAATCTAGAGAAGCTGCAGCTAAAAGTGCAAGAAAGACTGCAAATGCGCGCCAAAGATGGCAATTTGCAAAGGATGCCACTAAGAAGGGTGCAATGGGGCTGCAAGCTCAACTATCACGCACCTTCAAGAAGGATGAATCAAATCTGGAAAAAGTTAAAATTTTGAATCAAGCAACTTCTGAAGCAGATATTGAATTGTTGTCACATTCACGATCTACAACTTCAAGCATGGTTGCAAGTTCATCTGCAGCGCCAAAGGAAAAGGGAAAAGAACCCAGTGGTCTAATGCAGATAATACATGAAATTGAAAATGATCCAGATATTAATGACAACCTTCATACAGAAATAGAAACTAGAGATAAAGGTGTTACAGCATATGTGCCAAAGGGAAAACAACCACATACTCATAGCCAAATTTTTAAGTATGCATATTCTCAACTTGAAAAAGAGAAGGCTCAGCAACAGGAAAACAAGAAGCTTACCTTCTCGGGGGTAATTAAAATGGCTACAAACACTGAAAAAAGGAAAAGGCCTTTAATGGAGATTTCTTTCAAGGATCTGACTCTTAAATTGAAAGCTCAAAACAAACATATATTGAGATATGTTACTGGGAAAATTAAACCTGGCCGCATCACTGCTGTCATGGGCCCATCAGGAGCTGGCAAGACAACATTTCTTTCAGCTCTAGCCGGAAAGGCATTGGGATGCTCGGTCACTGGTTCAATTCTTATAAATGGAAGGAATGAATCAATCCACTCCTTTAAGAAAATTACTGGCTTTGTGCCACAAGATGATGTAGTTCATGGAAACCTGACGGTGGAAGAGAATCTCTGGTTCAGTGCACAGTGCAGGCTATCTGCTGACTTGTCAAAACCAGAAAAAGTTCTGGTTGTTGAAAGAGTTATTGAATTCTTGGGGCTTCAATCTGTGCGTAATTCCTTGGTTGGAACTGTGGAAAAGCGAGGGATCTCTGGAGGCCAAAGGAAACGTGTAAATGTTGGATTGGAAATGGTTATGGAACCTTCACTCTTGATCTTGGATGAACCCACATCTGGCTTGGACAGTGCATCATCTCAGCTCCTTCTAAGAGCACTAAGACGGGAAGCTCTTGAGGGAGTGAACATTTGCATGGTGGTTCACCAACCCAGCTATGCTTTGTTCAAGATGTTTGATGACCTGATACTTCTGGGAAAAGGTGGTCTTACTGTCTATCATGGATCTGCCAAGAAAGTTGAAGAATACTTTTCAGGCCTGGGGATCAATATTCCGGAGCGGATTAATCCTCCTGATTACTTCATTGACATTTTGGAGGGCATAACAACACCTGGTGGAAGCTCAGGACTCAGTTATAAAGAGCTTCCAGTTAGATGGATGCTTCATAATGGATATCCAATACCTCTTGATATGAGGCAGAATGCAGTTCAATTTGATATGTCCCAGAGTGTAAATTCAGCTAATGAAATAGATCCCAATGGATCTGGTCATGTGGGAAAAACCTTTGCTGGAGAATTATGGCAAGATATGAGAAACAATGTGGAACTGAGGGGGGAGAAGATAAGACTCAATTTTTTTAAATCCAAGGATTTATCTGACCGGAAAACTCCTGGTGTTTTCAAGCAATATAAGTACTTTCTTATACGGGTTGGGAAGCAGCGATTACGAGAAGCTAGGATCCAAGCCATTGATTATCTTATTTTGTTACTTGCTGGAGCCTGCTTAGGATCACTTACCAAATCAAGTGACCAAACATTTGGTGCAGCTGGGTATACCCATACGGTGATTGCTGTATCTCTTCTGTGCAAAATAGCGGCCTTGAGATCATTTTCCCTGGATAAATTACACTATTGGAGGGAGAGTGATTCTGGCATGAGCAGCTTGGCTTATTTCCTCTCTAAAGACACAATTGATCATTTTAATACACTGATCAAGCCTGTGGTGTATCTTTCTATGTTCTATTTCTTCACCAATCCGAGATCAACTTTTGCAGATAATTATGTTGTGCTGCTTTGTCTTGTATACTGTGTCACTGGCATAGCATATGCGTTGTCCATATTTTTTGAACCTGGTGCGGCCCAGCTGTGGTCAGTACTCCTTCCAGTTGTTTTGACTCTCATTGCAACACAACCAAAAGATAGTAAAATTTTGAAGGATATAGCTAATTTATGCTACTCTAAGTGGGCTTTACAAGCATTAGTTGTTGCAAATGCTGAAAGGTATCAGGGAGTGTGGCTCATAACACGCTGTGGTTCACTTTTGAAAAGTGGCTATAATCTTCATGATTGGAGTTTATGCATATCCATCCTCATTCTTATGGGTGTAATTAGCCGGGCCATAGCATTTTTCTGTATGGTTACCTTCCGAAAGAAGTAA 3528 0.4113 MAGPTTTSSLLIFSFSLFYCYVPIMPFPEAEAQNPFVLETQQKPLLQSFSTFVVTHSNFNMCRWSTNLKHLWVPIVVLSLFLGMMQLQCQQVNDYDQIDNPAVLPLVTQLVYRQISNLTSILSQQISKDSTFCVKDPDADWNQAFNFSSDLGFLASCIKKTRGDIAKRLCTAAEVKFFLNSLLGNSVSANYLKPNKNCNLTSWVSGCEPGWACSDHSSQKVDLKNSKEIPARTSNCQACCEGFFCPHGITCMIPCPLGSYCPLATLNKTTGVCEPYLYQLPPMQPNHTCGGANVWADVRSSSEIFCSAGSYCPTTTKRIPCSSGHYCRMGSTSEKRCFKLSSCNSNTATQNMQAYGIMLIAALSTLLLIIYNCSDQVLTTRERRVAKSREAAAKSARKTANARQRWQFAKDATKKGAMGLQAQLSRTFKKDESNLEKVKILNQATSEADIELLSHSRSTTSSMVASSSAAPKEKGKEPSGLMQIIHEIENDPDINDNLHTEIETRDKGVTAYVPKGKQPHTHSQIFKYAYSQLEKEKAQQQENKKLTFSGVIKMATNTEKRKRPLMEISFKDLTLKLKAQNKHILRYVTGKIKPGRITAVMGPSGAGKTTFLSALAGKALGCSVTGSILINGRNESIHSFKKITGFVPQDDVVHGNLTVEENLWFSAQCRLSADLSKPEKVLVVERVIEFLGLQSVRNSLVGTVEKRGISGGQRKRVNVGLEMVMEPSLLILDEPTSGLDSASSQLLLRALRREALEGVNICMVVHQPSYALFKMFDDLILLGKGGLTVYHGSAKKVEEYFSGLGINIPERINPPDYFIDILEGITTPGGSSGLSYKELPVRWMLHNGYPIPLDMRQNAVQFDMSQSVNSANEIDPNGSGHVGKTFAGELWQDMRNNVELRGEKIRLNFFKSKDLSDRKTPGVFKQYKYFLIRVGKQRLREARIQAIDYLILLLAGACLGSLTKSSDQTFGAAGYTHTVIAVSLLCKIAALRSFSLDKLHYWRESDSGMSSLAYFLSKDTIDHFNTLIKPVVYLSMFYFFTNPRSTFADNYVVLLCLVYCVTGIAYALSIFFEPGAAQLWSVLLPVVLTLIATQPKDSKILKDIANLCYSKWALQALVVANAERYQGVWLITRCGSLLKSGYNLHDWSLCISILILMGVISRAIAFFCMVTFRKK 1175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01324 1175 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 568 809 IPR003439 GO:0005524
Pumo3g01324 1175 MobiDBLite consensus disorder prediction 454 478 - -
Pumo3g01324 1175 Pfam ABC-2 type transporter 766 1175 IPR043926 GO:0140359
Pumo3g01324 1175 ProSitePatterns ABC transporters family signature. 709 723 IPR017871 GO:0005524|GO:0016887
Pumo3g01324 1175 FunFam ABC transporter G family member 24 562 804 - -
Pumo3g01324 1175 Gene3D - 566 803 IPR027417 -
Pumo3g01324 1175 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 308 1164 - -
Pumo3g01324 1175 CDD ABCG_EPDR 566 792 - -
Pumo3g01324 1175 SMART AAA_5 594 786 IPR003593 GO:0016887
Pumo3g01324 1175 Pfam ABC transporter 587 737 IPR003439 GO:0005524
Pumo3g01324 1175 MobiDBLite consensus disorder prediction 454 468 - -
Pumo3g01324 1175 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 568 801 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01324 Pumo-Chr3 20992956 21007648 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01324 592 787 Calmodulin-binding Proteins AT2G36910 25.116 4.98e-10 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01324 - - gmx:100775464 2058.49