Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01321 ATGCAGATCGCGTCCGACGTGGCGCACGGCCTCGATTACATCCACAACTTCTCCGGTTCCGGTTCGGATTCCGGTTCCGGAGTCGGATTCGTTCACAATCACATCAAGAGTTCGAGCATTGTTATCACGGAGGACAATTTTCGCGCCAAAATCTGCCACTTCGGCGCGTCGGATCTCTCCGGCGAGGCCGTTGCCGGTGCCGGAGAGCACTCCGGCGCCCGGACGGTGAGGCTCGAGGGGACGAGAGGCTACATGGCGCCGGAATTTCAAGTCTCCGGCGTCGCGACGAAGAAGACCGACGTGTATGCGTTCGGTGTAGTGGTTTTGGAGCTGCTGAGCGGGGAAGAGGCGGTGAAATTCGAATTCAACGACGACGGCGGTTACCGGAGGTTTAGCGTGGTGGAGACGGCGAAGGTGGCGGCGGAGGAGAACGGCGGCGTGAGGAAGTGGGTGGATAAGAGACTCAGGGATTCGTTTCCCGTGAAAGTTGCAGAGAGAATGATTCGGGTCGGGTTGGAGTGTGTCGGGGATGACCCGAATGAGAGACCCGATATGGGTCGGGTTTCTAATGAGGTGTCAAAGTTGTATTTGGAATCGAAGGAGTGGGATGAGAAAATGGGAACCGATATTGACTTGTCGGTCTCGTTTGCCCCACGGTGA 660 0.5727 MQIASDVAHGLDYIHNFSGSGSDSGSGVGFVHNHIKSSSIVITEDNFRAKICHFGASDLSGEAVAGAGEHSGARTVRLEGTRGYMAPEFQVSGVATKKTDVYAFGVVVLELLSGEEAVKFEFNDDGGYRRFSVVETAKVAAEENGGVRKWVDKRLRDSFPVKVAERMIRVGLECVGDDPNERPDMGRVSNEVSKLYLESKEWDEKMGTDIDLSVSFAPR 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01321 219 ProSiteProfiles Protein kinase domain profile. 1 197 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g01321 219 SUPERFAMILY Protein kinase-like (PK-like) 2 190 IPR011009 -
Pumo3g01321 219 Gene3D Transferase(Phosphotransferase) domain 1 1 215 - -
Pumo3g01321 219 Pfam Protein kinase domain 3 186 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g01321 219 PANTHER OS09G0572100 PROTEIN 1 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01321 Pumo-Chr3 20978793 20979452 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01321 2 207 Receptor kinase-like Gene Family AT1G51940 35.349 2.22e-30 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Pumo3g01321 Pkinase 2.4e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01321 - - gmx:100820374 380.948