Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01320 ATGTGCAAATCCAAAAAGAGCACCAGCGTGGTCCAGCCCCGAACCCGAAGAAACAACACGAACACAAACATGACACACTCCCCTCGCCCTCACAGAACACGAACCCCAACATCGTCATCGTCGAACTACGAAACCTCCACGAGCGATATTCCGATCACAGAATCAAGAAGCTACGTGTTCGAAAACAACACCACCAACAACGAGTTTGAGTGGTCAAAAACCTCTTCCATCTCAAGCCGCGCTTCTCTCTCCAGTCTTAAGGATACACTCCCTGAAAACCCTAACATCTACCACTTCTCCGAGATCTCCGCCGCCACCGCCAATTTCTCTTCGCCGCGCCTCTCCTCTTCCTCCTGGCGCTGCGTAATTCGCCACCGCGACGTCGTCGTTTCGCGCCGCAACTTCCGCCAACAGATTGATGTCCCGGAACTCAGCCGCCGCCTCTCCCTCATCTGCCGGAGCCACCACAGCAGCCTCGTGAAACTCCTCGGCGCGTCAATCTCAGGCGGCGTCATCATCCTCGTCTACGAATTCGTCCCCGGCGCCAGCCTCGCCGATTGCCTTCGCAACCGCCGGAAACCCTAG 585 0.5658 MCKSKKSTSVVQPRTRRNNTNTNMTHSPRPHRTRTPTSSSSNYETSTSDIPITESRSYVFENNTTNNEFEWSKTSSISSRASLSSLKDTLPENPNIYHFSEISAATANFSSPRLSSSSWRCVIRHRDVVVSRRNFRQQIDVPELSRRLSLICRSHHSSLVKLLGASISGGVIILVYEFVPGASLADCLRNRRKP 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01320 194 SUPERFAMILY Protein kinase-like (PK-like) 125 192 IPR011009 -
Pumo3g01320 194 Gene3D Phosphorylase Kinase; domain 1 66 178 - -
Pumo3g01320 194 PANTHER OS09G0572100 PROTEIN 1 194 - -
Pumo3g01320 194 MobiDBLite consensus disorder prediction 1 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01320 Pumo-Chr3 20978177 20978761 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01320 97 184 Receptor kinase-like Gene Family AT4G23290 36.170 1.07e-08 52.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Pumo3g01320 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01320 - - gmx:100820374 280.026