Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01313 ATGCTTGGTACTTTGGGTGTCGAATTGGTAAGTGCTCAAATTCGGCAACATATTCGCATATTGGTTACATGTTGTTCCTGGCATGAGAAGTCACACTCATACGTACCCAAAGATGTCCCAAAAGGTCACCTAGTTGTCTATGTTGGTGAGGATTGCAAGAGATTTGTCATCAAAGTAGGTATTCTCAACCATCCTCTCTTCCAGGCATTGCTGGACCATGCAGAGGATGTGTTTGGATTCACCAATGATTCTAAACTCCGCATCCCCTGCAATGAGAACATTTTCCTTCTTGTTCTTCACAATGCTGGTGATCTTGTCTAG 321 0.433 MLGTLGVELVSAQIRQHIRILVTCCSWHEKSHSYVPKDVPKGHLVVYVGEDCKRFVIKVGILNHPLFQALLDHAEDVFGFTNDSKLRIPCNENIFLLVLHNAGDLV 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01313 106 Pfam Auxin responsive protein 30 99 IPR003676 GO:0009733
Pumo3g01313 106 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 29 96 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01313 Pumo-Chr3 20847157 20848780 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01313 18 95 Calmodulin-binding Proteins AT4G34750 42.169 6.17e-18 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01313 K14488 - adu:107467907 119.783