Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01308 ATGGAATATTCCAAGGAAAAAAACCATAGCAATGGCAATGGTTCATTGAACCTTTGCAATGGTGGTAGCACGGACCCACTTAACTGGGGCATGGCCGCGGAAGCTTTGAAAGGTAGCCACCTTGATGAGGTGAAACGCATGGTGGAGGACTACCGTCACCCGCTGGTGACGCTAGGTGGCAAGAGCCTCACGGTGTCTCAGGTGGCGGCGGTTGCCACCCGCCACCACGGCGGCAGTGATTGTGGAGCTGGCCAAGGAGAGCCGCCACGGTGTCAAGGCCAGCAGCGACTGGGTCATGGAGAGCATGCTTAA 312 0.5705 MEYSKEKNHSNGNGSLNLCNGGSTDPLNWGMAAEALKGSHLDEVKRMVEDYRHPLVTLGGKSLTVSQVAAVATRHHGGSDCGAGQGEPPRCQGQQRLGHGEHA 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01308 103 Gene3D - 18 87 IPR024083 -
Pumo3g01308 103 MobiDBLite consensus disorder prediction 1 23 - -
Pumo3g01308 103 PANTHER HISTIDINE AMMONIA-LYASE 14 76 IPR001106 -
Pumo3g01308 103 MobiDBLite consensus disorder prediction 75 103 - -
Pumo3g01308 103 SUPERFAMILY L-aspartase-like 25 75 IPR008948 GO:0003824
Pumo3g01308 103 MobiDBLite consensus disorder prediction 8 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01308 Pumo-Chr3 20757261 20757572 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01308 25 73 Monolignol Biosynthesis Gene Families AT3G53260 69.388 2.22e-20 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01308 K10775 - gmx:100801470 129.413