Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01294 ATGCGGTCAATTCCTCTGGGAACCTCAGTATCTCCAACTCCTATAAACACCTCAAAAATATCATCTTTCACTCTTAATTTTAAGAAACCAAACACTTTCCCATCTTGGGGTTCAACTCCTCCTCCTCCTCCTCCTCATGAATCCTCTCTCTTTTCTCTCTCCCAATCAGGATTATGTAGAGCAAGTCAAGTTGTTGATTTGTTCCCAACCGTGTCTACTGAAATTATTGTGCGGGAGGCCAGGTTAGAGGACTGTTGGGAAGTGGCAGAGACTCACTGCAGCTCCTTCTTCCCTGAATATTCCTTCCCATTAGATTTTGTGCTGAGGATGGACAGATTGGTGGCCATGATGGCAGGATTCACTCTACCAAATGGTTGCAAGAGAATCTGTTTGGTTGCTGTTACTGGCAACACATTTGGTGAAACTTTATTATTTGGAAGTGATGATTTCAAGGTTGGTGGTTTTGATGGGAAATTCAGCCTCAACAAGGGATATGTGGCTGGTATATTAACAGTGGATACTGTTGCAGACTTTCTACCTAGGAAGGGGCCATTGCGACAGAGAAGGACTGGAATTGCATACATATCAAATGTGGCAGTCCGGGAAAAATTTAGGCGGAAGGGAATAGCTAAACACTTGGTTGCAAAGGCAGAATCACAAGCCAGAAGTTGGGGGTGTCGTGCTATTGCATTACACTGTGATTTGAAAAAACCCTGCAGCCACAAAGCTATACCAAGGCCAAGGTTTCAGGTGTATCAAAGTTCCAGAAGGAGCTAA 777 0.4402 MRSIPLGTSVSPTPINTSKISSFTLNFKKPNTFPSWGSTPPPPPPHESSLFSLSQSGLCRASQVVDLFPTVSTEIIVREARLEDCWEVAETHCSSFFPEYSFPLDFVLRMDRLVAMMAGFTLPNGCKRICLVAVTGNTFGETLLFGSDDFKVGGFDGKFSLNKGYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKHLVAKAESQARSWGCRAIALHCDLKKPCSHKAIPRPRFQVYQSSRRS 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01294 258 CDD NAT_SF 191 232 - -
Pumo3g01294 258 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 75 258 IPR000182 GO:0016747
Pumo3g01294 258 Gene3D - 72 250 - -
Pumo3g01294 258 Pfam Acetyltransferase (GNAT) family 166 234 IPR000182 GO:0016747
Pumo3g01294 258 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 1 241 - -
Pumo3g01294 258 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 67 235 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01294 Pumo-Chr3 20595114 20597929 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Pumo3g01294 Acetyltransf_1 4.6e-10 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01294 - - gmx:100305894 443.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g01294 3 20595114 20597929 Pumo3g01294 3 20595114 20597929 ECH
Pumo6g02249 6 42388720 42392241 Pumo3g01294 3 20595114 20597929 PCT