Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01269 ATGCCGCCTGAACCATTGCCTTGGGATCGAAAGGACTTCTTCAAGGAGAGGAAGCACGAGAGGTCGGAGTCGCTAGGGTCCGTCGCCAGATGGAGGGATTCCTCGCACCACCGCGACTTCAACCGCTGGGGATCCGCCGAGTTTCGCAGACCGCCAGGTCATGGTAAGCAGGGTGGTTGGCACCTGTTTTCCGAGGAATCTGGTCATGGGTATGCGATTTCTCGGTCCAGCAGCGACAAGATGCTGGAAGAAGATAGTCGGCCGTCGATCTCGCGTGGTGATGGAAAGTATGGCAGGAACAGTAGGGAAAATAGAGGAGGACCATTTGGTCAGAGAGATTGGCGAGGGCATTCGTGGGAACCCACCAGTGGTTCTATGAATTTTCCCAGGAGGCAGCAGGATATGAACAATGACCAGAGGTCAATAGATGATGCCCTAGCATATTCCTCTTATCCACATTCCGATTTCGGGAACGCTTGGGATCAGCACCACTTGAAAGACCAGCATGATAAGATGGGTGGTGTCAATGGGTTGGGAACAGGCCCAAGATGTGATAGAGAGAACTCTCTGGGTGACTGGAAGCCACTTAAATGGACCCGTTCTGGAAGCTTGTCATCTCGAGGCTCAGGTTTTAGCCACTCAAGTAGCTCTAGGAGCATGGGGGGAGCAGATTCCCATGAAGCAAAGGCTGAGTTGCTACCCAAAAGTGTGGCTGCTAATGAGTCGCATTCAGGGGAAGCTGCAGCTTGTGCAACATCTTCTGTGCCATCTGAGGATACAGCTTCTAGAAAAAAGCCTAGGCTGAATTGGGGCGAGGGACTTGCAAAGTATGAGAAGAAGAAAGTCGAGGTGCCTGATGCAAGTGCAAACAAAGATGGTCCTGTCTTGTCTACTAGTAACACAGAACCTTGTAATTTCCTCAGTCCCAGCTTAGTTGATAAAAGCCCAAAAGTTACAGGATTCTCAGAATGTGCATCTCCTGCAACTCCATCTTCTGTTGCCTGCAGTTCCTCACCTGGTATGGATGATAAATTATTTGGGAAGACTGCAAATGTGGACAACGATGTTAGTAATGTGACTGGTTCACCTGCTCCTGTGTCTGAAAATCATCTTGCGAGGTTTTCTTTTAACTTAGAGAAATTTGATATTGACTCCTTGAATAATTTGGGTTCTTCAATTATTGAGTTGGTACAATCTGATGATCCAACTTCTCTGGATTCTGGTCCAATGAGGTCCAATGCAATTAATAAGTTACTGATATGGAAAGCTGACATTTCAAAAGTGTTGGAGATGACTGAATCTGAAATAGATTTACTTGAAAATGAACTGAAGTCGCTAAAATCTGAATCTGGGGAAACATGTCCTTGTCCATGTCCAGTAGCCTTGGGCTCCCAGATTGTAGGTAGTGATGAAAAATCCTGTGAAGAACATGTTGGAGTCTCTGATCAGGTCATGCGGCCGGTACTGTTGAAAATTGTTGATGAATCCAATACAGAGAAGATGCCTCTTTCAACTAATTTATATAGTATTCATGAAAATGGCAAGGAAGAGGATATTGATAGTCCTGGAACAGCTACTTCTAAATTTGTTGAGCCTCTGCCTTTAGTTAAAGCAGTTTCTTGTGAAACCAGTGGATATGATAACTTCTCCGGGGACTTGGATGCTGTTCAGTCTACAGCTGTGAAATGCTTAGTTCCCTGTACTACTAGGAAAGAAGCTAGTGTGTCTGCTTGTGTTGATGGCAATACTTCTATGGAGCTAAAGGATAGCATGGATATTTTATGTAAATCAATTATTTCTTCCAATAAAGAATCTGCCAACAGAGCCAGTGAGGTATTTGATAAGTTATTGCCCAAAGATTGTTGCAAGATTGAGAAGATGGAAGCAAGCAGTGACACATGCACTCATGCCTTCATTATGGAAAAATTTGCTGAGAAAAAGCGATTTGCAAGATTTAAGGAGAGAGTTATTGCACTTAAGTTCAGAGCCTTGCATCACCTGTGGAAAGAAGATATGCGCTTACTGTCTATAAGGAAATGCCGACCAAAATCTCACAAAAAAAATGAACTAAGTGTGCGATCTACCTGTAATGGTAACCAGAAGAATCGATTGTCCATTCGATCACGTTTTCCCTTTCCTGCAGGAAATCAACTAAGCTTGGTTCCAACATCGGAGATAATTAATTTTACAAGCAAACTGCTTTCAGAATCCCAAGTTAAGGTGCAGAGAGACACCCTGAAAATGCCTGCATTAATTTTGGATGACAAAGAGAAGATGATTTCAAAGTTTGTATCTAGTAATGGGCTGGTTGAAGATCCATTGACCATTGAGAAAGAAAGGGCTATGATCAATCCTTGGACCCCAGAAGAGAGAGAAGTTTTCTTGGAGAAATTTGCTGCCTTCGGAAAAGATTTTCGAAAAATTGCTTCTTTTCTTGACCACAAGACAACTGCTGACTGTGTTGAATTCTACTACAAAAATCATAAATCTGATTGTTTTGAGAAACTTAAGAAGCAAGATGGTGGTAAGCTAGGGAAGTCATATTCAGCTAAAACTGACTTGGTGGCATCAGGTAATAAAAAATTGCGTGCAGGAAGCTCTCTTTTGGGTGGATATGGTAAAGTAAAGGCATCAAGGGGTGAGGACTTCATAGAGAAATCAAGCAGTTTTGACATTCTTGGGGATGAAAGAGAGACTGCTGCTGCAGCTGATGTATTGGCTGGTATATGTGGTTCTCTTTCATCCGAGGCTATGAGTTCCTGCATAACAAGTTCAGTTGATCCTGTAGAAGGTAACAGGGATAGGAAGTTCCTGAAAGTAAAGCCTTTTTGCAAACCTCCCATGACACCTGATGTTACTCAAGATGTTGATGATGAGACTTGTTCAGATGAGAGCTGTGGTGAAATGGATCCTACAGATTGGACCGATGATGAGAGGGGTGCTTTTCTTCAGGCTGTATCAACTTATGGGAAGGATTTTGCTAAGATAGCACGGTGTGTTGGGACAAGGTCCCAAGAACAGTGCAAAGTTTTCTTTAGCAAGGGCCGGAAATGCCTTGGATTGGATCTCATGCGCCCAATACCTGAGAATGTTGGATCCCCGGTGAATGATGATGCAAATGGGGGTGAGAGTGACACAGATGATGCATGTGTTGTTGAGACAGGTTCAGTGGTTGGAACTGATAAGTCTGGCACTAAAACAGACGAGGATCTGTCTTTTTATGGCACAAACACATACCATGATGAATCCCATCCTGTGGAAGCTAGGAACCTGTCAGCTGAATTTAATGAATCAAAGGAAACTAATGGGGGCGATGTAGATCTTGAAGATGCAAATGTCGTTTCTGGTGCTTGTCAAATTAATATTGATTCTAAACAGGGCTGTGATGGTAGTGAAGTTGTCTTGTGTGGTTCTGACAAGTCTGGTTCTGTTGGTGGACAAGCAGATATAATTATGTCAGATAGCGCAGAAGTTGGAAAAGATAAAGCAAATAAATTGGGAGGTGCAGCTACAGAATTGATATCTGCTCCAGATACAAGTGAACCATGTGAGAGTAATTCCGTTGCTGAGGATAGAATGGTGGTTTCTGAGGTTTCTTCTGGCGGTCTTGGAAATGAATTGGAGAGGCATAGAGTGTCTTCACCCCTATGTGTTGATGATAGAGATAATAAACATGAAGCTGATTCAGGTGTTATAGTTGATTTGAAAAGCTCTGTGCATGATTTAAGCACTATGGTAAATGCTTCACTCTCATCTTTGGGCAATTCTTGTTCAGGATTGAGTTTTAGTACTGAAAATAAGCATGTGCCCTTTGGAAAGCCTCATGTCTCTGCATTGTCTATGGAGGATCTTCATGCGACTTCAAACTCATTGTTGCAAAATACAGTTGCTGTTGATGTTCAATGTGAGAAAACAGCTAGCCAAGATCGACTGTCCTCTACTTGTGATATTCAGGGAGGTAGAGATGTGCACTCTCAGAGTTCCATTAGCAATGGTGACCATCAGCTCCCTATTACTAGGAGTTCATCAGACCATGTTGATGCTGTTAGCATTCTCCAGGGATATCCCTTGCAAGTTCCCGTGAAGAAAGAAATGAATGGTGATATCAATTGCAGCAGTTCAGCAACTGAATTGCCTCTTCTGCCCCAAAAGATTGAACCGGCTGATGATCATATCAAAACATTCCAGTCGTCAGATTCAGATAAAACATCCAGAAATGGTGATGTGAAACTGTTTGGGAAGATACTAACCAATCCTTCATCCACACAGAAACCTTGTGGGGGCGCTAAAGGGAGTGAAGAAAGTGGTACCCATCATCCTAAGTTAAGCAGCAAGTCGTCTAGCCTGAAATTTACTGGCCATCATAGTACTGATGGGAATTTGAAAATTTTGAAGTTTGATCGTAATGATTATGTTGGCCTTGAAAATGTTCCAATGAGGAGTTATGGTTATTGGGATGGGAACAGAATACAGACTGGTCTCTCGACATTGCCTGATTCTGCCATCTTGCTGGCAAAGTATCCTGCTGCCTTCAGTAATTATCCCACATCTTCTGCCAAATTGGAGCAACCGTCATTGCAGGCATATTCCAAGAATAATGAACGGCTCCTGAATGGTGCATCCACATTTACGACTAGAGACGTCAATGGCAGCAATGCTGTGATTGATTATCAGATGTTTAGAAGGGATGGTCCGAAAGTGCAGCCATTTATGGTAGACGTGAAGCACTGCCAAGATGTATTCTCTGAGATGCAGAGAAGAAATGGTTTCGAAGCAATCTCAAGTATACAGCAGCAGAGCAGGGGAATGATGGGAATGAATGGTGTTGGAAGACCGGGGATTCTTGTGGGAGGATCGTGCAGTGGGGTCTCAGATCCTGTGGCAGCAATCAAAATGCATTATTCCAATTCTGACAAGTATGGTGGTCAGACTGGGAGTATTGCAAGAGAGGATGAATCTTGGGGAGGGAAAGGGGACTGA 4980 0.4337 MPPEPLPWDRKDFFKERKHERSESLGSVARWRDSSHHRDFNRWGSAEFRRPPGHGKQGGWHLFSEESGHGYAISRSSSDKMLEEDSRPSISRGDGKYGRNSRENRGGPFGQRDWRGHSWEPTSGSMNFPRRQQDMNNDQRSIDDALAYSSYPHSDFGNAWDQHHLKDQHDKMGGVNGLGTGPRCDRENSLGDWKPLKWTRSGSLSSRGSGFSHSSSSRSMGGADSHEAKAELLPKSVAANESHSGEAAACATSSVPSEDTASRKKPRLNWGEGLAKYEKKKVEVPDASANKDGPVLSTSNTEPCNFLSPSLVDKSPKVTGFSECASPATPSSVACSSSPGMDDKLFGKTANVDNDVSNVTGSPAPVSENHLARFSFNLEKFDIDSLNNLGSSIIELVQSDDPTSLDSGPMRSNAINKLLIWKADISKVLEMTESEIDLLENELKSLKSESGETCPCPCPVALGSQIVGSDEKSCEEHVGVSDQVMRPVLLKIVDESNTEKMPLSTNLYSIHENGKEEDIDSPGTATSKFVEPLPLVKAVSCETSGYDNFSGDLDAVQSTAVKCLVPCTTRKEASVSACVDGNTSMELKDSMDILCKSIISSNKESANRASEVFDKLLPKDCCKIEKMEASSDTCTHAFIMEKFAEKKRFARFKERVIALKFRALHHLWKEDMRLLSIRKCRPKSHKKNELSVRSTCNGNQKNRLSIRSRFPFPAGNQLSLVPTSEIINFTSKLLSESQVKVQRDTLKMPALILDDKEKMISKFVSSNGLVEDPLTIEKERAMINPWTPEEREVFLEKFAAFGKDFRKIASFLDHKTTADCVEFYYKNHKSDCFEKLKKQDGGKLGKSYSAKTDLVASGNKKLRAGSSLLGGYGKVKASRGEDFIEKSSSFDILGDERETAAAADVLAGICGSLSSEAMSSCITSSVDPVEGNRDRKFLKVKPFCKPPMTPDVTQDVDDETCSDESCGEMDPTDWTDDERGAFLQAVSTYGKDFAKIARCVGTRSQEQCKVFFSKGRKCLGLDLMRPIPENVGSPVNDDANGGESDTDDACVVETGSVVGTDKSGTKTDEDLSFYGTNTYHDESHPVEARNLSAEFNESKETNGGDVDLEDANVVSGACQINIDSKQGCDGSEVVLCGSDKSGSVGGQADIIMSDSAEVGKDKANKLGGAATELISAPDTSEPCESNSVAEDRMVVSEVSSGGLGNELERHRVSSPLCVDDRDNKHEADSGVIVDLKSSVHDLSTMVNASLSSLGNSCSGLSFSTENKHVPFGKPHVSALSMEDLHATSNSLLQNTVAVDVQCEKTASQDRLSSTCDIQGGRDVHSQSSISNGDHQLPITRSSSDHVDAVSILQGYPLQVPVKKEMNGDINCSSSATELPLLPQKIEPADDHIKTFQSSDSDKTSRNGDVKLFGKILTNPSSTQKPCGGAKGSEESGTHHPKLSSKSSSLKFTGHHSTDGNLKILKFDRNDYVGLENVPMRSYGYWDGNRIQTGLSTLPDSAILLAKYPAAFSNYPTSSAKLEQPSLQAYSKNNERLLNGASTFTTRDVNGSNAVIDYQMFRRDGPKVQPFMVDVKHCQDVFSEMQRRNGFEAISSIQQQSRGMMGMNGVGRPGILVGGSCSGVSDPVAAIKMHYSNSDKYGGQTGSIAREDESWGGKGD 1659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01269 1659 CDD SANT 974 1012 IPR001005 -
Pumo3g01269 1659 SMART sant 970 1018 IPR001005 -
Pumo3g01269 1659 SMART sant 782 830 IPR001005 -
Pumo3g01269 1659 MobiDBLite consensus disorder prediction 956 971 - -
Pumo3g01269 1659 Gene3D - 947 1025 - -
Pumo3g01269 1659 Coils Coil 422 449 - -
Pumo3g01269 1659 MobiDBLite consensus disorder prediction 168 267 - -
Pumo3g01269 1659 MobiDBLite consensus disorder prediction 1414 1453 - -
Pumo3g01269 1659 MobiDBLite consensus disorder prediction 118 144 - -
Pumo3g01269 1659 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 864 1656 - -
Pumo3g01269 1659 ProSiteProfiles SANT domain profile. 781 832 IPR017884 -
Pumo3g01269 1659 MobiDBLite consensus disorder prediction 41 145 - -
Pumo3g01269 1659 Pfam Myb-like DNA-binding domain 785 826 IPR001005 -
Pumo3g01269 1659 Pfam Myb-like DNA-binding domain 973 1012 IPR001005 -
Pumo3g01269 1659 Gene3D - 762 834 - -
Pumo3g01269 1659 SUPERFAMILY Homeodomain-like 971 1020 IPR009057 -
Pumo3g01269 1659 ProSiteProfiles SANT domain profile. 972 1012 IPR017884 -
Pumo3g01269 1659 MobiDBLite consensus disorder prediction 1640 1659 - -
Pumo3g01269 1659 SUPERFAMILY Homeodomain-like 769 829 IPR009057 -
Pumo3g01269 1659 MobiDBLite consensus disorder prediction 1315 1342 - -
Pumo3g01269 1659 MobiDBLite consensus disorder prediction 199 222 - -
Pumo3g01269 1659 MobiDBLite consensus disorder prediction 954 974 - -
Pumo3g01269 1659 MobiDBLite consensus disorder prediction 78 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01269 Pumo-Chr3 20239502 20247651 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pumo3g01269 Myb_DNA-binding 1.2e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01269 - - gmx:100810588 3006.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g01269 3 20239502 20247651 Pumo3g01269 3 20239502 20247651 ECH