Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01261 ATGAAGAAGATTAAGGAATTCCACATGGGGAGGAAAGGGGGTTGGTTCTCTGCAGTGAAGAGAGTTTTTATTTCCGATTCCAAAAAGGAACAGAAACAACAACAACATCATCATCATCATAAGTCAAAGTTAGGATGTTTTGGGGCTCATCATTATGAGGATCTAGAAGGGTTACCTGAAGGAGCACCAATTCCTGTTATTCCCTCACTTCCACCAAGAAAAGACACCAAACCAACAAGTGAGGCAGAGAATAATGAACAGAGCAAGCAAGCATTTTCTTTGGTTTTGGCCACTGCTGTGGCTGCTGGGGCTGCTGTTGCTGCTGCTGCAGAGGTTGCTCGTCTCACAAACACGCCTCGTTCTAATGGAAAAGCGAATCAAGAAATGGCAGCTATCAAAATTCAAACAGCATACCGTGGATATTTGGCAAGAAGATCCTTGCGTGGTTTGAGAGGTTTGGCGAGGTTGAAAACATTGGTGCAAGGGCAATCTGTTCAAAGGCAAGCGGCTACTACCTTACAATGCATGCAAACTCTTTCAAGGTTGCAATCTCAGGTTCGTGCACGGAAGGTCAGAATGTCTGAGGAGAACCAGGCTCTTCAAAGGCAAATGCAGCAGAAACGTGAAAAGGAATTTGACAAGTCGCAATCTAATCATATTGGAGAGAAGTGGGATGATAGCTCGAAATCAAAGGAGCAAGTTGAAGCAAAATTGTTGAACAGACAAGTAGCCGCTATGAGAAGAGAGAAGGCTTTGGCCTATGCATCAACACATCAGCAAACGTGGAGGAACTCTTCAAAATCTGCTACAAATGCCACATTTATGGATCCAAACAATCCCCACTGGGGCTGGAATTGGCTAGAGCGATGGATGGCTGCAAGACCATGGGAGGGTCAAAACACTACATACCAAAATGGCCATGCATCTGCCAAGAGTGTTGCAAGCCAAACCATGTCACTTGGAGAAATCACAAAATTGTATTCCCTCCGTGATCAGAATACTGATATCAAAAACTCCCCAGCAAACGAAAAACCAAGCCGTCCCCGCAGCCAAAATTCCCCTTCAACAACAGCCTCAAAGGCCCCATTAGCCAATGGAGCAAAGGCAAAGCTACAATCAAGTCTAAGAGGTGGTTCATGGGGTGGTGATGGTGACTCAAAAATCATGTTTAGCAAAACCTCAGAAAACAACCGCAGGCACAGCATTGGAGTGTCTCCAGTGAGAGATGATGAGAGCCATTCAAGCTCATCACCATCCACAAAGGTTGCAACAAAGGCCAAGTCATCATCATCATCATCATCCAAAGTGAGAAGTGCATCAGTTGGTCTACATAGAAATGGAACACCTGAAAAAGCAGCTCCTGCTCCTCTAAAGAAGAGGCTTTCTTTCCCTGCTTCTCCAGCAGGTACAAGAAGGTATGCTGTTCCAACTAGGCCGGGAAATGTGGCTGCCACTAAGAGTGTTGCTAGAAGATGA 1476 0.4533 MKKIKEFHMGRKGGWFSAVKRVFISDSKKEQKQQQHHHHHKSKLGCFGAHHYEDLEGLPEGAPIPVIPSLPPRKDTKPTSEAENNEQSKQAFSLVLATAVAAGAAVAAAAEVARLTNTPRSNGKANQEMAAIKIQTAYRGYLARRSLRGLRGLARLKTLVQGQSVQRQAATTLQCMQTLSRLQSQVRARKVRMSEENQALQRQMQQKREKEFDKSQSNHIGEKWDDSSKSKEQVEAKLLNRQVAAMRREKALAYASTHQQTWRNSSKSATNATFMDPNNPHWGWNWLERWMAARPWEGQNTTYQNGHASAKSVASQTMSLGEITKLYSLRDQNTDIKNSPANEKPSRPRSQNSPSTTASKAPLANGAKAKLQSSLRGGSWGGDGDSKIMFSKTSENNRRHSIGVSPVRDDESHSSSSPSTKVATKAKSSSSSSSKVRSASVGLHRNGTPEKAAPAPLKKRLSFPASPAGTRRYAVPTRPGNVAATKSVARR 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01261 491 Coils Coil 183 210 - -
Pumo3g01261 491 MobiDBLite consensus disorder prediction 61 87 - -
Pumo3g01261 491 MobiDBLite consensus disorder prediction 330 491 - -
Pumo3g01261 491 PANTHER IQ-DOMAIN 5-RELATED 9 466 - -
Pumo3g01261 491 MobiDBLite consensus disorder prediction 408 441 - -
Pumo3g01261 491 MobiDBLite consensus disorder prediction 197 231 - -
Pumo3g01261 491 Gene3D iswi atpase 124 151 - -
Pumo3g01261 491 SMART iq_5 126 148 IPR000048 GO:0005515
Pumo3g01261 491 MobiDBLite consensus disorder prediction 330 362 - -
Pumo3g01261 491 Coils Coil 229 249 - -
Pumo3g01261 491 ProSiteProfiles IQ motif profile. 127 155 IPR000048 GO:0005515
Pumo3g01261 491 Pfam IQ calmodulin-binding motif 129 148 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01261 Pumo-Chr3 20168551 20172152 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01261 9 478 IQD Protein Family AT5G03040 41.752 8.09e-93 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01261 - - gmx:100807725 729.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g01261 3 20168551 20172152 Pumo3g01261 3 20168551 20172152 ECH