Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01244 ATGGCCGACTTATGTGCAACAGAGATGAATAGAATACTTGAAATATATACTGGATTTGAGGGAATATCAACATTGGTTGACGTAGGAGGTGGCAATGGACAAAATCTCAAAATGATAATCTCCAAATACCCTTTAATTAAAGGAATTAATTTTGATCTGCCCCAAGTGATTGAAAATGCACCACCGCTTCCAGGTACCCTGCAACCCTGA 210 0.3905 MADLCATEMNRILEIYTGFEGISTLVDVGGGNGQNLKMIISKYPLIKGINFDLPQVIENAPPLPGTLQP 69
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01244 69 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 4 62 IPR029063 -
Pumo3g01244 69 PANTHER O-METHYLTRANSFERASE 6 60 IPR016461 GO:0008168
Pumo3g01244 69 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 69 IPR016461 GO:0008168
Pumo3g01244 69 Pfam O-methyltransferase domain 5 62 IPR001077 GO:0008171
Pumo3g01244 69 Gene3D Vaccinia Virus protein VP39 7 65 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01244 Pumo-Chr3 20013919 20014128 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01244 1 65 Monolignol Biosynthesis Gene Families AT5G54160 63.077 2.12e-23 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01244 - - gmx:100798347 130.954