Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01243 ATGGTGGATTCCAATGTCACCAAGAATCAGCTATTTACAACTTCCCGTCAACAAACTAAGGATGGTGCTTGTCTATCTGCAATGTTGCTTTGCACTAATCTAGTGTACCCTGCAGTACTCAATGCTGCTATTGAGCTGAACTTGTTTGAGATCATAGCTAAGGCAACCCCACCTGGTTCGTTTATGTCATCCCATGAAATTGCTTTTAAGCTCCCAACCCAACACCCTGACTTGCCTAATAGGCTTGACCGCATGCTGCGTTTGCTTGCTAGTTATTCTGTTCTTACTAGTTCCACTCGCACCACACAACATGGTGCCACTCAGACAGTTTATGGACTCTCACAAGTTGGACAATACTTTGTCCCCGATGGAACTAGGGGCCACTTGGCTTCATTAGCAACATTTGTCTGCTATCCAGCACTCTTACAAGTTTGGTTGAATTTCAAGGAAGCAGTGGTTGATTCAGACATTGACTTGTTCAAGAAACTTCATGGAGTAACTAAACGATCCAAAAATGAACCAAATTTTTAA 531 0.4275 MVDSNVTKNQLFTTSRQQTKDGACLSAMLLCTNLVYPAVLNAAIELNLFEIIAKATPPGSFMSSHEIAFKLPTQHPDLPNRLDRMLRLLASYSVLTSSTRTTQHGATQTVYGLSQVGQYFVPDGTRGHLASLATFVCYPALLQVWLNFKEAVVDSDIDLFKKLHGVTKRSKNEPNF 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01243 176 Gene3D - 33 159 IPR036388 -
Pumo3g01243 176 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 28 176 IPR016461 GO:0008168
Pumo3g01243 176 Pfam Dimerisation domain 39 90 IPR012967 GO:0046983
Pumo3g01243 176 FunFam Caffeic acid 3-O-methyltransferase 4 120 - -
Pumo3g01243 176 SUPERFAMILY "Winged helix" DNA-binding domain 22 124 IPR036390 -
Pumo3g01243 176 PANTHER O-METHYLTRANSFERASE 28 168 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01243 Pumo-Chr3 20013239 20013911 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01243 14 167 Monolignol Biosynthesis Gene Families AT5G54160 41.558 9.11e-28 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01243 - - gmx:100787536 291.967