Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01235 ATGTCAGCATCAGAAATTGCTTCTATGCTACCAAAACAACACCCAGACTTACCCAATAGGCTTGAGCGCATGCTGCGTTTGCTTGCCAGCTATTCTCTTATCACTTGTTCCTCTCACACCAATGAAGATGGCAGCACTGAGAGAACTTATGGACTCTCACCTGTTGGAAAATACTTTGTTGGTGATGAAAGTAGGGGCTGTGCGGGTTCATTCACAACATTTCTCCACCATCCTACAGTGTCACACAACTTTGGTTTTGAAGGAGTGAGTACCCTGGATGATGTGGGAGGATGTACAGGGCAAAATCTTCACATGATAATCTCCAAGTACCCTACAATTAAGGGTATTAATTTTGATTTGCTCCAAGTTGTTGAAAAAGCTCCAGCTTATCCAGATGAAGAATGCTTAAGCATTTTGAGGAACTGTCACAATGCAGTGCCACAAAATGGAAACGTGATTGTGATAGAGTTTATAGTAGCAGAAGCATCAGAGTCAAAAGTATCAAAGCTTGTTTCCACCCTTGACAACCTCATGTATATCACAAGTGGTGGGAAGGAAAGAACTGAAAAGGAGTACGAGGCATTGTGCAAGCTTTCTGGATTTTCAAGGTTTCAAGTTGTCTGTCGTGCGTTCTCTGCCTTAGGAATCATCGAATTTCACAAATAA 666 0.4204 MSASEIASMLPKQHPDLPNRLERMLRLLASYSLITCSSHTNEDGSTERTYGLSPVGKYFVGDESRGCAGSFTTFLHHPTVSHNFGFEGVSTLDDVGGCTGQNLHMIISKYPTIKGINFDLLQVVEKAPAYPDEECLSILRNCHNAVPQNGNVIVIEFIVAEASESKVSKLVSTLDNLMYITSGGKERTEKEYEALCKLSGFSRFQVVCRAFSALGIIEFHK 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01235 221 PANTHER O-METHYLTRANSFERASE 1 63 IPR016461 GO:0008168
Pumo3g01235 221 Gene3D Vaccinia Virus protein VP39 83 130 IPR029063 -
Pumo3g01235 221 Gene3D Vaccinia Virus protein VP39 131 210 IPR029063 -
Pumo3g01235 221 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 221 IPR016461 GO:0008168
Pumo3g01235 221 Pfam Dimerisation domain 1 29 IPR012967 GO:0046983
Pumo3g01235 221 Gene3D - 1 59 IPR036388 -
Pumo3g01235 221 FunFam Caffeic acid 3-O-methyltransferase 1 59 - -
Pumo3g01235 221 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 70 217 IPR029063 -
Pumo3g01235 221 SUPERFAMILY "Winged helix" DNA-binding domain 1 63 IPR036390 -
Pumo3g01235 221 Pfam O-methyltransferase domain 130 202 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01235 Pumo-Chr3 19931225 19932570 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01235 1 221 Monolignol Biosynthesis Gene Families AT5G54160 34.740 1.27e-43 148