Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01234 ATGGGGGATTCCAATGTCACTAAGAATCACCTGTTTGCAACTTCTCCTCAACAAACTGAGGATGGTGCTTGCTTATCTGCAATGCTGCTTAGCACTAATCTAGTGTACCCTGCAGTACTCAATGCTGCTATTGAGCTGAACTTGTTTGAGATCATAGCTAAGGCAACCCCACCTGGTTCATTTATGTCATCCCATGAAATTGCTTCTAAGCTCCCAACCCAACACCCTGACTTGCCTAATAGGCTTGACCGCATGCTGCGTTTGCTTGCTAGTTATTCTGTTCTTACTAGTTCCACTTGCACCACACAACATGGTGCCACTGAGACAGTTTATGGACTCTCACAAGTTGGACAATACTTTGTCCCCGACGGAACTAGGGGCTACTTGGCTTCATTCACCACCTTTGTCTGTTATCCACCACTCTTACAAGTTTGGTTGAACTTCAAGGAAGCAGTGGTTGATGCAGACATTGACTTGTTCAAGAAACTTCATGGAGTATCAAAGTACCAGTACATGGAAAAGGATCCGAAAATGAACCAAATTTTTAACAAGTCAATGGCCGACGTGTGTGCAACAGAGATGAATAGAATACTTGAAATATATACTGGATTTGAGGGAATATCAACATTGGTTGACGTAGGAGGTGGCAATGGACAAAATCTCAAAATGATAATCTCCAAATACCCTTTAATTAAAGGAATTAATTTTGATCTGCCCCAAGTGATTGAAAATGCGCCACCGCTTCCAGGGATTGAGCATGTTGGAGGAGATATGTTTGCAAGAGTTCCACAGGGTGACGCCATAATACTAAAGGCTGTATGCCACAATTGGTCAGATGAAAAATGCTTAGAATTTTTAAGCAATTGTCACAAAGCATTGTCTCCAAATGGGAAGGTGATTGTTGTGGAGTTCATATTGCCAGAAGAACCAGAACCAACTGAAGAATCCCAGCTTGTTTCCACTCTTGACAACCTCATGTTTATCACGGTTGGTGGAAGGGAAAGAACTCAGAAACAATATGAGAATTTGTGCAAGCTTTCTGGATTTTCAAATTTTCAAGTTGCTTGTCGTGCCTTCTCTAGTCTGGGAGTGATGGAATTTTACAAAGTAGCTTAG 1116 0.4185 MGDSNVTKNHLFATSPQQTEDGACLSAMLLSTNLVYPAVLNAAIELNLFEIIAKATPPGSFMSSHEIASKLPTQHPDLPNRLDRMLRLLASYSVLTSSTCTTQHGATETVYGLSQVGQYFVPDGTRGYLASFTTFVCYPPLLQVWLNFKEAVVDADIDLFKKLHGVSKYQYMEKDPKMNQIFNKSMADVCATEMNRILEIYTGFEGISTLVDVGGGNGQNLKMIISKYPLIKGINFDLPQVIENAPPLPGIEHVGGDMFARVPQGDAIILKAVCHNWSDEKCLEFLSNCHKALSPNGKVIVVEFILPEEPEPTEESQLVSTLDNLMFITVGGRERTQKQYENLCKLSGFSNFQVACRAFSSLGVMEFYKVA 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01234 371 Gene3D Vaccinia Virus protein VP39 179 358 IPR029063 -
Pumo3g01234 371 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 128 366 IPR029063 -
Pumo3g01234 371 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 28 369 IPR016461 GO:0008168
Pumo3g01234 371 Pfam O-methyltransferase domain 145 350 IPR001077 GO:0008171
Pumo3g01234 371 PANTHER O-METHYLTRANSFERASE 27 359 IPR016461 GO:0008168
Pumo3g01234 371 Gene3D - 35 197 IPR036388 -
Pumo3g01234 371 FunFam Caffeic acid O-methyltransferase 123 369 - -
Pumo3g01234 371 FunFam Caffeic acid 3-O-methyltransferase 5 120 - -
Pumo3g01234 371 CDD AdoMet_MTases 209 306 - -
Pumo3g01234 371 Pfam Dimerisation domain 39 90 IPR012967 GO:0046983
Pumo3g01234 371 SUPERFAMILY "Winged helix" DNA-binding domain 21 124 IPR036390 -
Pumo3g01234 371 PIRSF O-mtase 5 369 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01234 Pumo-Chr3 19924197 19925706 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01234 14 359 Monolignol Biosynthesis Gene Families AT5G54160 48.703 2.13e-112 330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01234 - - gmx:100787536 705.286