Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01224 ATGGGAATTTCTTCACAGCCTTCTCTTGTTTCCCTCTCTTTGAAAGATCTGATTCAGGGAACTGAAGAAAACAGAACTTCATCTTCATATGGGTGTTTGTGGAGCAAAGTCTTGGCAGCACAAGCCAAGAAGGGCACAAGGAGAAGTGTTAGGAAGCCAAGGAGGATTTTGATGAAGAGAAGGAGTGGTTCTAGAAGAGGATCCAATGGGATTCGGAGACGTGTGAGAACATTGAAGAGACTTGTACCCAATTGTGACTCTTTGGGGATGGATGGACTCTTCAGAGAAACAGCTAATTACATATTGTCTCTACAAACGAGAGTGAGAGTCATGCAGGTTATGGTTAAGGTGTTGACAGGCTCTGACGAGTGA 372 0.4409 MGISSQPSLVSLSLKDLIQGTEENRTSSSYGCLWSKVLAAQAKKGTRRSVRKPRRILMKRRSGSRRGSNGIRRRVRTLKRLVPNCDSLGMDGLFRETANYILSLQTRVRVMQVMVKVLTGSDE 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01224 123 CDD bHLH_AtIBH1_like 60 115 IPR044549 GO:0006355
Pumo3g01224 123 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 27 118 IPR044660 GO:0006355
Pumo3g01224 123 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 55 104 IPR011598 GO:0046983
Pumo3g01224 123 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 69 118 IPR036638 GO:0046983
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01224 62 122 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G47270 58.065 1.04e-18 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01224 - - gmx:100794627 191.43