Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01215 ATGGAGCCTCTCTCTGCCACCAAACACGACAACAATCTCGCCAAGCCTTCTTCTCTTCACATGGAGGCTCCGGCGCCGGAGGCCAGTCCTCTCCGTAAGATCATGGTGGTGGCCTCCATCGCCGCCGGGGTGCAATTCGGGTGGGCCCTACAGCTCTCCCTGCTCACCCCCTACGTCCAGCTGCTGGGTATCCCTCACACTTGGGCTGCCTTCATCTGGCTCTGCGGCCCAATCTCTGGCATGCTGGTCCAGCCCATCGTGGGCTACCACAGCGACCGCTGCACCTCCCGCTTCGGCCGCCGCCGCCCCTTCATCGCCGCCGGTGCCCTCGCCGTCGCCATCGCCGTCTTCCTCATCGGCTACGCCGCCGACCTCGGCCACATGTTCGGCGACTCCCTCGCCAAAAAAATCCGCCCCCGCGCCATCGCCATCTTCGTCGTCGGCTTCTGGATCCTCGACGTCGCCAACAACATGCTCCAAGGGCCATGCCGCGCCCTCCTGGCCGACCTCTCCGCCGGCAACCACCGCAAAACGCGAAACGCCAACGCGTTCTTCTCCTTCTTCATGGCCGTCGGAAACGTGCTAGGTTACGCAGCAGGCTCCTACAGCGGCCTCCACCACGTGTTCCCCTTCACGAAAACAAAAGCCTGCGATGTTTACTGCGCAAACCTGAAAAGCTGCTTCTTCCTCTCCATCGCGCTTCTTCTGACGCTGGCCACCATTGCCCTGACCTACGTGAAGGAGAAAACGGTGTCGTCCGAGAAGAGCAGCGCGAACGTGGATGAGGACGGGTCCCACGGGGGCATGCCCTGTTTCGGGCAGTTATTCGGTGCGTTTCGGGAACTGAAGCGTCCCATGTGGATCCTTCTGTTGGTGACGTGTCTCAACTGGATTGCGTGGTTCCCCTTCCTGCTCTTCGACACCGACTGGATGGGGCGTGAGGTGTACGGAGGAACCGTTGGGGAAGGGAAGGCATACGATAGAGGTGTGCGCGCGGGTGCGTTGGGTCTCATGTTGAACTCTGTTGTTCTCGGTGCGACGTCGTTGGGAGTGGAAGTGCTCGCGCGTGGAGTTGGGGGCGTGAAGAGGTTGTGGGGGATCGTTAACTTCTTGCTCGCGGTTTGTTTGGCCATGACCGTTTTGGTTACCAAGTTGGCAGAACATAATCGCCAATACACCGTCCTCCCCAACGGCCACCAGGAACCGCTGCCGCCTCCCGGCGGCGTCAAAGCCGGCGCGTTGGCTCTCTTTTCCGTCCTCGGAATCCCACTTGCGATTACTTACAGCATCCCCTTTGCTCTAGCATCAATATTCTCCAGCACCTCAGGGGCAGGCCAGGGATTATCACTGGGAGTCCTCAATCTTGCAATTGTCATACCACAGATGGTGGTGTCTGTGATAAGTGGACCATGGGATGCTCTATTTGGAGGTGGTAACTTGCCAGCGTTCGTGGTGGGTGCGGTGGCGGCCGCAGCCAGTGGCATTTTATCCATAATCCTGCTGCCATCTCCACCACCGGATTTGGCCAAAGCAGCAACTGCAGCCGGAGGAGGGTTCCATTAA 1563 0.5982 MEPLSATKHDNNLAKPSSLHMEAPAPEASPLRKIMVVASIAAGVQFGWALQLSLLTPYVQLLGIPHTWAAFIWLCGPISGMLVQPIVGYHSDRCTSRFGRRRPFIAAGALAVAIAVFLIGYAADLGHMFGDSLAKKIRPRAIAIFVVGFWILDVANNMLQGPCRALLADLSAGNHRKTRNANAFFSFFMAVGNVLGYAAGSYSGLHHVFPFTKTKACDVYCANLKSCFFLSIALLLTLATIALTYVKEKTVSSEKSSANVDEDGSHGGMPCFGQLFGAFRELKRPMWILLLVTCLNWIAWFPFLLFDTDWMGREVYGGTVGEGKAYDRGVRAGALGLMLNSVVLGATSLGVEVLARGVGGVKRLWGIVNFLLAVCLAMTVLVTKLAEHNRQYTVLPNGHQEPLPPPGGVKAGALALFSVLGIPLAITYSIPFALASIFSSTSGAGQGLSLGVLNLAIVIPQMVVSVISGPWDALFGGGNLPAFVVGAVAAAASGILSIILLPSPPPDLAKAATAAGGGFH 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01215 520 Gene3D MFS general substrate transporter like domains 29 514 IPR036259 -
Pumo3g01215 520 PANTHER SUGAR TRANSPORTER 31 500 - -
Pumo3g01215 520 FunFam Sucrose transport protein 28 501 - -
Pumo3g01215 520 MobiDBLite consensus disorder prediction 1 22 - -
Pumo3g01215 520 NCBIfam sucrose/proton symporter 30 506 IPR005989 GO:0005886|GO:0008515|GO:0015770
Pumo3g01215 520 Pfam MFS/sugar transport protein 42 299 - -
Pumo3g01215 520 SUPERFAMILY MFS general substrate transporter 34 505 IPR036259 -
Pumo3g01215 520 CDD MFS_SLC45_SUC 34 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01215 Pumo-Chr3 19559143 19562639 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01215 22 520 Sucrose Transporter Gene Family AT1G22710 70.553 0.0 697
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01215 K15378 - gmx:547679 939.488