Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01211 ATGATGCTCCAAACACGAGAACATGAACATCCTTTACTACTCTCCTTTGTCTTGTTCTCCGCTGTCATCTCCACAATTTCAGGAACCACCACCATCTCACCGGGCACAACCCTCTACGCTTCCAACACAACCCAATCATGGTCCTCTCCCAACAACACTTTCTCTCTCCACTTCCTCCCCCTCCAGCCTCCAGCTTCCCCTCCTTCCTTCACCGCCGCCATTCTCTACTCCAGCGGTGCCCCCGCCGTCTGGTCCGCCGGAAATGGCGCCTCCGTGGACTCCGGCGGATCCCTCCGGTTCCTCCCCTCCGGCAACCTCGTCCTCGTTAACGGGTCGGGTTCCACCGTGTGGGACTCTGGAACTTCCGACATGGGTGTCTCCTCCGCCACCCTTCACGACAATGGGAACTTGGTTCTCTCCAGTGCCACCGGTTCCGTGTGGTCGAGCTTCGACAACCCCACTGACACCATTGTTCCGTTTCAGAACTTCACCGTTGGTATGGTTTTGCGTTCTGGGTTGTTCTCATTTTCTGTTCTTAGGTCCGGGAACCTCACCCTCAAGTGGAGTGACAGTGTGCCTTACTGGGATCAAGGCTTGAACTCTTCCATGAGTGTTGTGAATTTGAGTTCACCTGTTTTGGGGTTGGAACCAAAGGGGGTTTTGCAGCTTTTTTATCCCAATTTGAGTGCTCCTGTTTTGGTTGCTTATAGCAGTGACTATGGTGAAGGGAGTGATGTGTTGAGGGTTTTGAAGTTGGATGGTGATGGGAATTTGAGGGCTTATAGCTCTAAGAGGGGTAGTGGGACTGTGAGTTCAACATGGGTTGCTGTTGAGGATCAATGTGAGGTTTTTGGTTACTGTGGAAATAATGGTGTTTGTAGTTACAATGATTCTAGCTCTAGCCCCATTTGTGGATGTCCATCTCAGAATTTTGAGATGGTTGATCCTAGTGATAGTACGAAAGGGTGTAGGAGGAAGGTGAGGCTTGAGGATTGTGTAGGGAAGGTGGCGATGTTGCAACTTGACCATGCTCGGTTCTTGACTTATCCTCCTGTGTTTTTGATCAATCCTGAGGTGTTTTTCATTGGTATTTCAGCTTGCAGTGGGAATTGTCTTGCTGCTAGTTCTTGTTTTGCTTCCACTTCCTTGTCTGATGGAAGTGGACTTTGTTACATAAAGACGTCAAATTTTATTAGTGGTTACCAGAATCCCGCTCTACTTAGCACTTCATATATCAAGGTTTGTGGACCAGTGGCTCCTAACTCAGCACCTTCCTTGGAGAATGTGCATTGGAGGTTACATGGTTGGGTAGTAGCTCTTGTTGTTTTGAGTACCCTTTTATGTTTCCTTGTCTTTGAGGGTGGTTTATGGTTGTGGTGCTGTAGAAACAAGCAACGATTTGGAGGGTTTGCTGCTCAGTATACTCTTCTTGAGTATGCTTCTGGTGCACCAGTTCATTTCTCTTATAAGGAGCTTCAAAGGTCAACAAAAAGGTTCAAGGAGAAACTAGGTGATGGGGGATTTGGTGCTGTTTACAAAGGAACCCTTGTTAATCAAACTGTTGTTGCAGTTAAGCAACTTGAGGGCATTGAGCAGGGAGAGAAACAGTTTAGGATGGAAGTTTCTACCATAAGTAGTACCCATCATTTAAATTTAGTGAGGCTGATTGGTTTTTGCTCTGAAGGGAGTCACAGGCTTCTGGTATATGAGTTTATGAAAAATGGATCTCTTGATAATTTTCTTTTTGTTAATGATTCAGGAAAATTGTTGAACTGGGGGTATAGATTCAACATTGCTCTAGGTGCTGCTAAGGGCTTGACATACCTTCATGAGGAGTGTAGAAACTGCATTGTCCATTGTGATGTAAAACCGGAAAACATTCTTTTAGATGAGAATTACAATGCAAAAGTCTCGGATTTTGGCCTTGCAAAGCTCCTAAGTCCAGTGGATCACAGGCACCGGACCTTGACAAGTGTGAGAGGAACCAGAGGGTATTTAGCTCCAGAATGGCTAGCAAATCTTCCCATAACTTCCAAATCTGATGTTTACAGTTATGGTATGGTTTTGTTGGAGATAGTGAGTGGTAGAAGGAACTTTGAAATCTCAGAAGAAACAAGTAGAAGAAAGTTTTCCACCTGGGCCTATGAAGAGTTTGAGAAAGGTAACATCATGGGAGTCATTGACAGAAGACTGGTTAGCCAAGAAATCAACTTGGAGCAGGTGAAAAGAGTGCTTATGGCATGTTTTTGGTGCATACAGGAACAACCATCTCATAGGCCAACTATGAGCAAAGTTGTGCAAATGCTAGAAGGTGTGATAGATATTGAGAGGTCACCAGCCCCAAAAATCAGTAGCAGCAATGCCACTCCTATCTCCACTATTGCAACTTCATCAGCTCCAAATTACTCCTCATCTTCATCTTTGTTTACTTTTTGA 2436 0.454 MMLQTREHEHPLLLSFVLFSAVISTISGTTTISPGTTLYASNTTQSWSSPNNTFSLHFLPLQPPASPPSFTAAILYSSGAPAVWSAGNGASVDSGGSLRFLPSGNLVLVNGSGSTVWDSGTSDMGVSSATLHDNGNLVLSSATGSVWSSFDNPTDTIVPFQNFTVGMVLRSGLFSFSVLRSGNLTLKWSDSVPYWDQGLNSSMSVVNLSSPVLGLEPKGVLQLFYPNLSAPVLVAYSSDYGEGSDVLRVLKLDGDGNLRAYSSKRGSGTVSSTWVAVEDQCEVFGYCGNNGVCSYNDSSSSPICGCPSQNFEMVDPSDSTKGCRRKVRLEDCVGKVAMLQLDHARFLTYPPVFLINPEVFFIGISACSGNCLAASSCFASTSLSDGSGLCYIKTSNFISGYQNPALLSTSYIKVCGPVAPNSAPSLENVHWRLHGWVVALVVLSTLLCFLVFEGGLWLWCCRNKQRFGGFAAQYTLLEYASGAPVHFSYKELQRSTKRFKEKLGDGGFGAVYKGTLVNQTVVAVKQLEGIEQGEKQFRMEVSTISSTHHLNLVRLIGFCSEGSHRLLVYEFMKNGSLDNFLFVNDSGKLLNWGYRFNIALGAAKGLTYLHEECRNCIVHCDVKPENILLDENYNAKVSDFGLAKLLSPVDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEISEETSRRKFSTWAYEEFEKGNIMGVIDRRLVSQEINLEQVKRVLMACFWCIQEQPSHRPTMSKVVQMLEGVIDIERSPAPKISSSNATPISTIATSSAPNYSSSSSLFTF 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01211 811 SUPERFAMILY Protein kinase-like (PK-like) 480 770 IPR011009 -
Pumo3g01211 811 Gene3D Phosphorylase Kinase; domain 1 470 571 - -
Pumo3g01211 811 FunFam S-receptor-like serine/threonine-protein kinase 471 571 - -
Pumo3g01211 811 CDD B_lectin 31 153 IPR001480 -
Pumo3g01211 811 PIRSF SRK 2 810 IPR024171 GO:0004674
Pumo3g01211 811 Gene3D Transferase(Phosphotransferase) domain 1 572 786 - -
Pumo3g01211 811 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 153 276 - -
Pumo3g01211 811 SMART serkin_6 497 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g01211 811 Gene3D - 151 274 IPR036426 -
Pumo3g01211 811 SMART blect_4 29 153 IPR001480 -
Pumo3g01211 811 Pfam S-locus glycoprotein domain 244 307 IPR000858 GO:0048544
Pumo3g01211 811 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 572 779 - -
Pumo3g01211 811 ProSiteProfiles Protein kinase domain profile. 497 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g01211 811 ProSiteProfiles Bulb-type lectin domain profile. 29 152 IPR001480 -
Pumo3g01211 811 Gene3D - 25 150 IPR036426 -
Pumo3g01211 811 Pfam D-mannose binding lectin 83 165 IPR001480 -
Pumo3g01211 811 CDD STKc_IRAK 503 771 - -
Pumo3g01211 811 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 28 152 - -
Pumo3g01211 811 Pfam Protein kinase domain 500 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g01211 811 PANTHER OS07G0415500 PROTEIN 13 781 - -
Pumo3g01211 811 ProSiteProfiles EGF-like domain profile. 277 317 IPR000742 -
Pumo3g01211 811 ProSitePatterns Protein kinases ATP-binding region signature. 503 525 IPR017441 GO:0005524
Pumo3g01211 811 SUPERFAMILY alpha-D-mannose-specific plant lectins 76 199 IPR036426 -
Pumo3g01211 811 ProSitePatterns Serine/Threonine protein kinases active-site signature. 617 629 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01211 Pumo-Chr3 19497879 19500807 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01211 418 779 Receptor kinase-like Gene Family AT5G20050 37.984 1.86e-79 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pumo3g01211 Pkinase 5.4e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01211 - - gmx:100810753 1489.94