Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01209 ATGTATGCAGGGGACATATGGAGCTTTGGGGTTATCATATTGGAGTTGTACATAGGTAGGCTTCCTTTTGCGGTTGGGAAGAAGGAAGGTGATTGGGTGAGGCTGATGTGTGACATTTGTATGGCTGAGCCCCCCGAGGCTCCTCCTTATGCTTCCATTCACTTTAGAGATTTCATCTCCCGCTGCTTGCAGCGTGATCCCTCTCGCCGCTGGTCTGCCTCCACCTTGCTCCAGCACCCATTCAATTCCTTGCTCCCAACCTCCAACAAAATCAGTGTGACTGTGATCCTCCTCTCTTTAATAGTTAATCTATGTATGTGCTTATGGAGTCCGGAATATTTCTATTATCCCAGTTGA 357 0.479 MYAGDIWSFGVIILELYIGRLPFAVGKKEGDWVRLMCDICMAEPPEAPPYASIHFRDFISRCLQRDPSRRWSASTLLQHPFNSLLPTSNKISVTVILLSLIVNLCMCLWSPEYFYYPS 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01209 118 SUPERFAMILY Protein kinase-like (PK-like) 3 95 IPR011009 -
Pumo3g01209 118 ProSiteProfiles Protein kinase domain profile. 1 82 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g01209 118 Gene3D Transferase(Phosphotransferase) domain 1 2 96 - -
Pumo3g01209 118 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 2 82 - -
Pumo3g01209 118 Pfam Protein kinase domain 3 81 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01209 Pumo-Chr3 19424735 19425091 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01209 2 81 MAP Kinase Kinase Gene Family AT3G21220 66.250 7.36e-34 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Pumo3g01209 Pkinase 1.9e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01209 K13413 - gmx:100818488 137.117