Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01191 ATGGAGGTTCACAACTTGCTTTTACTCGTCACACTATTCCTGGTCACGACCCGGTTCATTCTGAACCGCCGCGTTAGAAAAAACCAACCCCCCGGTCCAACCGGATTCCCCATAATCGGAAACCTCCACCAACTGGGCCCCAAACCCCACTGTTCCCTCTCCTCGCTGGCCCAAACCTACGGCCCAATAATGTCCCTCGGCCTGGGCTCGGTCACCGTGGCCGTGGTCTCGTCCCCCACCGCGGCCCAAGAAATCCTCCAAAAGAACGAGCAAGCCTTCGCGAACCGCCCCATCCCGGAATCCGTGGCGGCCCAGCCCAACGTGGGTGACACCCTAGCCTGGGCCCCCGGCGACCCACGGTGGCGCAACCGCCGCCGCGTGTGCACCACCCAAATCTTCACCACCCAACGCCTCGACCTGCTACAACACCTCCGCCACGGCAAAGTGCAGCAACTGGTTCACCACCTTCAGAAAAAAGCTTCCAATAAAAAAAGCGTTGACATCGGCGAACTCGCGTTCGCGACGATGCTGAACCTGGTTTCGAACACGGTGTTCTCGGAGGACCTTGTGGACCCCGAGTTCGAGAGCGCCGGGGAGTTCAAGGAGCTCGTGTGGAGGATCATGGAGGACGCGGGGAAGGTTAACCTCTCCGACTACTTTCCCTTGCTCAAGAGGCTCGACTTGCAGGGCGTGAAGCGACACGTGGCGGTTTCCTATGTGAGGTTGCATGAGATTTTTGATGACATGATTCGGAAACGTGTTGCGGAGAGAGAGGGTTCGCGTGGCGCAAGGGGGGACTTCTTGGACGTCTTGCTTGATCATTGTGAACAAGGGGAGGGGTCCGATTTCACCGTCCAAAGCATCAAGCCATTGATTCTGGATTTGTTCATTGCGGGAAGTGACACATCAGGATCAACATCAGAATGGGCAATGGCAGAGCTTCTACGAAACCCAGAAGTGATGCAGAAAGCAAGAGAGGAACTGATCCAAGTGATAGGCACATCCAACGAAGTAAAAGAATCAGACATTCCTAGACTTCCCTACATCCAAGCAATAGTGAAAGAAACCCTTCGCCTTCACCCACCTGTGCCCCTTCTCTTGCCTTATGTTGCAGCACACGATGTTGAAGTAAGTGGCTACACCATTCACAAAGGGAACCAAGTCCTCATCAATGCATGGTCTACTGGGAGGAACCCTCAGTTTTGGGATAACCCTTTGTTATTTCAGCCCGAAAGGTTTCTTAGGTCCAACATAGACTTCAAAGGCAGGGATTTCGAGTATTTACCTTTTGGTGCTGGGAGGAGAATTTGCCCTGGCTTGCCACTTGCCAATAGGATGATTACTTTGATGTTGGCTACGTTTGTACACTCTTTTGAGTGGGAGCTTCCTCAGGGTGTCACTCCTCAAACGCTTGACATGAGTGAGCACTATGGAATAACGTTGAAGAGGCTTTCTCCTCTTTGTGCTTTTCCAATATCAGTATGA 1485 0.5306 MEVHNLLLLVTLFLVTTRFILNRRVRKNQPPGPTGFPIIGNLHQLGPKPHCSLSSLAQTYGPIMSLGLGSVTVAVVSSPTAAQEILQKNEQAFANRPIPESVAAQPNVGDTLAWAPGDPRWRNRRRVCTTQIFTTQRLDLLQHLRHGKVQQLVHHLQKKASNKKSVDIGELAFATMLNLVSNTVFSEDLVDPEFESAGEFKELVWRIMEDAGKVNLSDYFPLLKRLDLQGVKRHVAVSYVRLHEIFDDMIRKRVAEREGSRGARGDFLDVLLDHCEQGEGSDFTVQSIKPLILDLFIAGSDTSGSTSEWAMAELLRNPEVMQKAREELIQVIGTSNEVKESDIPRLPYIQAIVKETLRLHPPVPLLLPYVAAHDVEVSGYTIHKGNQVLINAWSTGRNPQFWDNPLLFQPERFLRSNIDFKGRDFEYLPFGAGRRICPGLPLANRMITLMLATFVHSFEWELPQGVTPQTLDMSEHYGITLKRLSPLCAFPISV 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01191 494 PRINTS E-class P450 group I signature 81 102 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g01191 494 PRINTS E-class P450 group I signature 427 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g01191 494 PRINTS E-class P450 group I signature 307 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g01191 494 PRINTS E-class P450 group I signature 350 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g01191 494 PRINTS E-class P450 group I signature 437 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g01191 494 PRINTS E-class P450 group I signature 287 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g01191 494 PRINTS E-class P450 group I signature 391 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g01191 494 PRINTS E-class P450 group I signature 57 76 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g01191 494 CDD CYP76-like 57 491 - -
Pumo3g01191 494 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 7 493 - -
Pumo3g01191 494 Pfam Cytochrome P450 30 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g01191 494 PRINTS P450 superfamily signature 428 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g01191 494 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g01191 494 PRINTS P450 superfamily signature 437 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g01191 494 PRINTS P450 superfamily signature 351 362 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g01191 494 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 430 439 IPR017972 GO:0005506|GO:0016705
Pumo3g01191 494 FunFam Cytochrome P450 76C4 21 490 - -
Pumo3g01191 494 Gene3D Cytochrome P450 17 486 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g01191 494 SUPERFAMILY Cytochrome P450 23 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01191 Pumo-Chr3 19185226 19188899 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01191 8 492 Cytochrome P450 AT2G45550 42.972 3.17e-147 429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01191 - - vra:106769993 831.247