Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01169 ATGCCGGAATCGGAGACAGGAACGCCAACGGCGGCGTCGGTGCCGGCAACGCCGGATACTCCGGGAGGGCCGTTATTCACGTCGCTCCGAGTTGACTCACTGTCGCACGAGCGTGACTCGTTCACAATGGCTCGGTGCAAGTGTTTGCCGACCAAGGGCCACACCTGCTTCACTGATTTCTCAGTTGGTGTTCCACTTCCCAATGTTTCTCTCACTCAAAAGGTTGGAGCAGAGTTTGTGGGGACCTTCATATTGATATTTGCTGCAACTGCTGGACCCATAGTGAACAACAAGTACAATGGAGTGGAGACTCTAATGGGAAATGCTGCTTGTGCAGGGTTAACTGTGATGTTCATTATTCTCTCTATTGGCCACATCTCAGGTGCACATCTCAACCCATCCCTCACCATTGCCTTTGCAGCATTTCGCCACTTCCCTTGGACCCATGTCCCAGCCTACATAGCAGCACAAGTCTCTGCCTCCATCTGTGCCTGTTATGCTCTCAAAGGTGTCTATCACCCTTTCCTCTCTGGTGGGGTCACTGTCCCTTCTAGTTCTGTCAGCGTTGGCCAGGCTTTTGCAACCGAGTTTATCATCACTTTTAATCTCTTGTTTGTGGTCACTGCTGTTGCTACTGATACTCGTGCGGTTGGTGAATTGGCAGGTATTGCTGTTGGGGCTACTGTTTTGCTCAACATTCTCATAGCAGGGCCAACAAGTGGTGGTTCGATGAATCCGGTGCGCACGTTGGGTCCAGCGGTTGCAGCAGGAAATTACAAGCATATATGGATCTATTTGGTGGCACCAACGCTGGGTGCTCTCGCTGGTGCTGGCGTTTACTCGCTCGTGAAGCTGCGTGACAATGACAACGAGGCTGAACCGCCGCGACAAGTTAGGAGTTTCCGTCGCTAG 912 0.5208 MPESETGTPTAASVPATPDTPGGPLFTSLRVDSLSHERDSFTMARCKCLPTKGHTCFTDFSVGVPLPNVSLTQKVGAEFVGTFILIFAATAGPIVNNKYNGVETLMGNAACAGLTVMFIILSIGHISGAHLNPSLTIAFAAFRHFPWTHVPAYIAAQVSASICACYALKGVYHPFLSGGVTVPSSSVSVGQAFATEFIITFNLLFVVTAVATDTRAVGELAGIAVGATVLLNILIAGPTSGGSMNPVRTLGPAVAAGNYKHIWIYLVAPTLGALAGAGVYSLVKLRDNDNEAEPPRQVRSFRR 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01169 303 PANTHER AQUAPORIN NIP2-1 57 288 IPR034294 -
Pumo3g01169 303 MobiDBLite consensus disorder prediction 1 15 - -
Pumo3g01169 303 PRINTS Major intrinsic protein family signature 226 248 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo3g01169 303 PRINTS Major intrinsic protein family signature 149 168 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo3g01169 303 PRINTS Major intrinsic protein family signature 112 136 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo3g01169 303 PRINTS Major intrinsic protein family signature 195 213 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo3g01169 303 PRINTS Major intrinsic protein family signature 73 92 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo3g01169 303 PRINTS Major intrinsic protein family signature 263 283 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo3g01169 303 SUPERFAMILY Aquaporin-like 70 289 IPR023271 -
Pumo3g01169 303 ProSitePatterns MIP family signature. 130 138 IPR022357 -
Pumo3g01169 303 FunFam Aquaporin NIP2-1 62 295 - -
Pumo3g01169 303 Pfam Major intrinsic protein 69 280 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo3g01169 303 Gene3D Glycerol uptake facilitator protein. 66 294 IPR023271 -
Pumo3g01169 303 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01169 Pumo-Chr3 18855154 18862431 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01169 25 303 Major Intrinsic Protein MIP AT4G10380 75.439 1.48e-148 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01169 K09874 - gmx:100804356 564.303