Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01165 ATGGCCTCCAAAGGTCCCCACCCAGAATCAATTGATGCATTGAAGTCTACAATGTCTGTTCAAAAGGATCCAGATAAGTTCTTCATGTCCATCAGTCAAGGAGAGAAAAAGCCATTTGACTTTTTACGTGTTCTATATGATGGTTGCATTGCTGGTGGTGTTGCTGGTGTCGTTGTAGAAACAGCTTTATACCCCATTGATACCATCAAAACTCGACTACAGGTTGCTCGTGACGGAGGGAAAATTGTTTTGAAGGGTCTGTACTCTGGATTGTCTGGAAATCTTGTTGGTGTCTTACCAGCTTCAGCAATTTTTATTGGTGTGTATGAACCCACAAAGCAGCAATTGCTAAAGTCGTTGCCTGAGAATCTCAGTGCTGTGGCTCATTTTGCTGCAGGTGCTATTGGAGGCATTGCTTCTTCTCTTGTTCGTGTTCCAACTGAGGTTGTTAAGCAAAGGATGCAGATTGGGCAATTTAGATCAGCCCCTGATGCTGTCCGTCTTATTGTCGCTAATGAGGGTTTTAAAGGTCTTTATGCGGGATATGGATCTTTCTTATTGCGAGATTTACCATTTGATGCTATAGAACTATGCCTTTATGAGCAGCTCCGTATTGGGTATAAATTAGCGGCAAAAAGAGATCCTAATGATCCAGAGAATGCTATGCTTGGGGCAGTGGCTGGTGCCATAACTGGAGCAGTTACAACTCCTCTTGATGTAGTAAAGACCAGATTGATGGTTCAGGGATCACAAAACCATTACAAAGGCATTTCTGATTGTGTGAGAACAATAGTTAAAGAAGAAGGAAGTCATGCTCTTTTTAAGGGTATTGGGCCTAGAGTTTTGTGGATAGGAGTTGGAGGTTCAATATTTTTTTGTGTTCTTGAGAAGACAAAGCAAATTCTTGCTCAGAGCCGGCACCCCAAAACTGAGACTCAGAAGTGA 945 0.4243 MASKGPHPESIDALKSTMSVQKDPDKFFMSISQGEKKPFDFLRVLYDGCIAGGVAGVVVETALYPIDTIKTRLQVARDGGKIVLKGLYSGLSGNLVGVLPASAIFIGVYEPTKQQLLKSLPENLSAVAHFAAGAIGGIASSLVRVPTEVVKQRMQIGQFRSAPDAVRLIVANEGFKGLYAGYGSFLLRDLPFDAIELCLYEQLRIGYKLAAKRDPNDPENAMLGAVAGAITGAVTTPLDVVKTRLMVQGSQNHYKGISDCVRTIVKEEGSHALFKGIGPRVLWIGVGGSIFFCVLEKTKQILAQSRHPKTETQK 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01165 314 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 21 311 - -
Pumo3g01165 314 PRINTS Mitochondrial carrier protein signature 48 61 IPR002067 GO:0055085
Pumo3g01165 314 PRINTS Mitochondrial carrier protein signature 224 246 IPR002067 GO:0055085
Pumo3g01165 314 PRINTS Mitochondrial carrier protein signature 61 75 IPR002067 GO:0055085
Pumo3g01165 314 Gene3D Mitochondrial carrier domain 47 314 IPR023395 -
Pumo3g01165 314 ProSiteProfiles Solute carrier (Solcar) repeat profile. 219 301 IPR018108 -
Pumo3g01165 314 Pfam Mitochondrial carrier protein 48 118 IPR018108 -
Pumo3g01165 314 Pfam Mitochondrial carrier protein 219 304 IPR018108 -
Pumo3g01165 314 Pfam Mitochondrial carrier protein 124 204 IPR018108 -
Pumo3g01165 314 ProSiteProfiles Solute carrier (Solcar) repeat profile. 42 115 IPR018108 -
Pumo3g01165 314 FunFam S-adenosylmethionine carrier 1 chloroplastic/mitochondrial 47 314 - -
Pumo3g01165 314 ProSiteProfiles Solute carrier (Solcar) repeat profile. 124 206 IPR018108 -
Pumo3g01165 314 SUPERFAMILY Mitochondrial carrier 49 296 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01165 Pumo-Chr3 18833095 18840945 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01165 132 304 Chloroplast and Mitochondria Gene Families AT2G30160 29.834 1.05e-14 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01165 K15111 - gmx:100800051 526.939