Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01156 ATGGTCGGCTTCTCCTCCCATTTCTCTCTCTTTTTCTTTGGATCAGCTGCAGCCATAGAATTAATTGCCTCAAGAACACCCGTTAATGTTATGGGCTGCGTTCAGGCCAAGTCATTGGATTTGGAAGAAGGTCCACACTACAGGACCCTAGACAGGTTGAAGTTGGATAATGGGTATGTTCCAAGCACTGACTTTGTTGCTCATAGAAGATCCACCGGTCAAAGACACGAGCCTAATAATAAGGAGTATGAAAGGCTGCATCAGCATCAGAGAGAGCAACCCAGAAAGCATAATCATAATAATAAAGTTGAGTCTGGTGTTGCCAATGGTGAAGGGCTTCATCATAGGGGCAAGTTGGTTGGTAGAGAGGGCAGGAGAGTCACACGTCGTGATGATAAGAAGTTGGCAAATAACTGTTGCTTTGAGGATGAGATGGTTGATGGCTGGCCAAAGTGGTTGGTTGATAATGTTCCTACACAAGTGTTGGCTGGCTTGGTTCCCAGGAGTGCTGAATCATACAAAATGATTGATAAGGTAGGACAAGGAACCTACAGCAATGTTTATAAAGCTCTGGATCGAGACACAGGAGAAATTGTGGCCCTGAAGAAGGTTAAATTCAATACATCAGAGCCTGAAAGCATTAAGTTTATGGCAAGAGAAATTATGATATTACAGAGACTGGATCATCCCAATGTATTAAAACTCAAAGGATTAGCCACTTCAAGAATGCAGTACAGTATATATCTAGTTTTTGACTTCATGCAAACAGATTTGGCAAGAGTTATTACTCGTCCCGAAGAGAGACTAACTGAACCACAGGTCAAGTGCTATATGCATCAATTGCTTTCAGGTCTTCAGCATTGCCATGACAGGGGAATTCTGCATCGAGATATAAAGGGGTCAAACCTTTTGATTGATAAAAATGGGATGCTTAAGATTGCAGATTTTGGTCTTGCCAATTTTTATGGTCCAGACCGTCACCAGCCTCTCACAAGTCGGGTTGTGACACTATGGTACAGAGCTCCTGAGTTATTGTTAGGTGACACAGATTATGGAGTTGGTATTGATCTATGGAGTGCTGGATGTCTCCTGGCAGAAATGTTTAAAGGAATTCCAATCATGCCTGGCAGAACTGAGGTTGAGCAGCTTCATAAAATTTTCCGGCTATGTGGCACACCATCAGAGGAGTATTGGAGAAAATTGAAACTTTCTACAACTTTTAGACCTCCAAAGTCTTATAGACCTAGCCTTGTAGAAAGTTTCAGGGATCTCCCTCCATCTTCTTTAGGTCTTTTATGCACTTTGCTTGCTTTGGATCCTGCATTCCGTGGCAGTGCATCTAAAGCTCTTAAAAATCAGTTTTTCTTTACAAGCCCATTGGCATGTGACCTCTCTGGCCTGCCTGTTATCTTCAGCAAGGATGATGAGCTTGTTCAAGCCGATGAACAGATCAAGTAA 1458 0.4259 MVGFSSHFSLFFFGSAAAIELIASRTPVNVMGCVQAKSLDLEEGPHYRTLDRLKLDNGYVPSTDFVAHRRSTGQRHEPNNKEYERLHQHQREQPRKHNHNNKVESGVANGEGLHHRGKLVGREGRRVTRRDDKKLANNCCFEDEMVDGWPKWLVDNVPTQVLAGLVPRSAESYKMIDKVGQGTYSNVYKALDRDTGEIVALKKVKFNTSEPESIKFMAREIMILQRLDHPNVLKLKGLATSRMQYSIYLVFDFMQTDLARVITRPEERLTEPQVKCYMHQLLSGLQHCHDRGILHRDIKGSNLLIDKNGMLKIADFGLANFYGPDRHQPLTSRVVTLWYRAPELLLGDTDYGVGIDLWSAGCLLAEMFKGIPIMPGRTEVEQLHKIFRLCGTPSEEYWRKLKLSTTFRPPKSYRPSLVESFRDLPPSSLGLLCTLLALDPAFRGSASKALKNQFFFTSPLACDLSGLPVIFSKDDELVQADEQIK 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01156 485 Gene3D Transferase(Phosphotransferase) domain 1 256 463 - -
Pumo3g01156 485 Gene3D Phosphorylase Kinase; domain 1 163 255 - -
Pumo3g01156 485 ProSiteProfiles Protein kinase domain profile. 173 455 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g01156 485 PANTHER CELL DIVISION PROTEIN KINASE 171 460 - -
Pumo3g01156 485 SUPERFAMILY Protein kinase-like (PK-like) 168 459 IPR011009 -
Pumo3g01156 485 Pfam Protein kinase domain 173 455 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g01156 485 MobiDBLite consensus disorder prediction 69 114 - -
Pumo3g01156 485 FunFam Putative serine/threonine-protein kinase 256 485 - -
Pumo3g01156 485 ProSitePatterns Protein kinases ATP-binding region signature. 179 202 IPR017441 GO:0005524
Pumo3g01156 485 SMART serkin_6 173 455 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g01156 485 FunFam probable serine/threonine-protein kinase At1g54610 160 255 - -
Pumo3g01156 485 ProSitePatterns Serine/Threonine protein kinases active-site signature. 293 305 IPR008271 GO:0004672|GO:0006468
Pumo3g01156 485 MobiDBLite consensus disorder prediction 69 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01156 Pumo-Chr3 18731373 18734627 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01156 168 475 Core Cell Cycle Gene Families AT5G10270 46.933 5.21e-93 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Pumo3g01156 Pkinase 1.3e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01156 K08819 - gmx:100776854 844.728