Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01154 ATGGTGACGCGTGTCTGTAACCCGAGTGGGAGTATTGAAGTGTCGGAAGGTGTCGGTCTTGTGGCTTTGGTAGGAACCCTCTGGATCAGCAGCAGCCATAAAGAGGGAGTGCCCGGAGTTATGGTTTGGGTGCTTTGTGGTGTCACAGTCACAGGTTTACAAATATCTGATGTGGAAGTATATAGAGCAGTGGAGTCAGTAAGTTATGGTGCGTCCAAAACAATGATGGCTGGAGTTAGTGGCAGTAGCACTACCTTGTTCTTTATTTCTTGCTTACTTTTTGCTTTCTGCATCCATGCCTCCTCTCAGCCACTTCCTCCAATTGTGGATGGACTGTCATGGAATTTCTATAGGTCGAGCTGTCCCAAGCTTGAAGGGATAGTGACCAGCCACCTCCAGAAGGTGTTCAAGCAGGACAATGGTCAAGCCCCTGCCTTGCTCAGGATCTTCTTCCATGACTGCTTCGGTTGCGATGGGTCGATATTGTTGGATGGAAGTCCAAATGAAAAGGATCAACCAGCAAACATAGGGATAAGGCCAGAGGCCTTGCAGACCATTGAAAACCTTCGATCTCTTGTTCACAAGGAGTGTGGAAGGGTTGTCTCTTGCGCTGACCTCGTTGTTCTAGCCGCACGCGATGCTGTTACTCTGTCAGGGGGGCCAAAATTTGCAGTGCCACTGGGAAGAAAAGATGGCCTAACCTTCAGCATAAACGGAACAAGGAACCTTCCACCGCCGTCATTCCGAACCGGACAGCTCCTGGACGCATTCGCGGGCAGAAACTTGGACACCACCGACGTGGTCGCACTGTCCGGGGCCCACACCTTCGGTAGGGCCCACTGCGCCACATTCTTCAGCCGCATCAACCAGACGGAGCCACCCATCGACCCCTCCTTGAACAACAACCTCATCAAAACATGTCCCTCTTCCCAGTCCCCCAACACGGCCGTGCTGGACGTGCGAACCCCCAACGTGTTCGACAACAAGTACTACGTTAACCTCGCCAACCGGCAGGGTTTGTTCGCCTCGGACCAGGACCTGTTCGGTGACGCCAGGACTAAGGGGATTGTGAACTCCTTTGCTTCTAACCAGAGACTGTTCTTTGAGAAGTTTGCTGTTGCGGTTGTTAAGTTGAGTCAGTTGGATAAGGACATTGCTCAAGCTGCTGGCTTGCTTCGCCTTCACTTCCATGACTGCTTTGTTCAGGGTTGTGATGGGTCAGTTTTATTGGATGGATCAGCAAGTGGGCCGAGTGAGAAAGATGCACCACCAAACTTTACTTTGAGACCTGAGGCCTTCAAGATCATCGAAAACCTTCGTGGTCTTTTAGAGAAGAGCTGTGGAAGAGTCGTCTCCTGCTCTGACATCACTGCCCTCGCTGCACGTGATGCTGTTTTCATTTCAGGAGGACCAGACTATGAGATTCCCTTGGGAAGAAGAGATGGGCTAACCTTTGCCACAAGACAAGTGACATTGGACAACCTTCCACCACCCTCAAGCAACACCACCACCATCCTAAGCTCCCTCGCCACAAAAAACCTCGACCCCACCGATGTGGTAGCCCTCTCAGGTGGCCACACCATAGGAATCAGCCACTGCAGCTCTTTCACCAACAGGCTCTACCCCACCCAAGACCCCGTCATGGACAAAACCTTCGGCAAAAACCTCAAACTCACGTGCCCCACCAACACCACCGACAACACCACAGTGCTGGACATTCGATCCCCCAACACGTTCGACAACAAGTACTACGTTGACCTCATGAACCGCCAGGGCCTCTTCACCTCGGACCAGGATTTGTACACTGATAAGAGGACCAAAGGCATTGTCACCGACTTTGCCGTTAACCAGAGCCTCTTCTTTCAGAAGTTTGTGTTCGCTATGCTCAAGATGGGTCAGCTTAATGTGTTGACGGGGACACAAGGAGAGATTCGTGCCAATTGCTCCGTTAGAAATGCGAATAACAAGTCCTTCTTGACTTCTGTAGTGGAAGATGTGGTGGAAACATTGATAGAAATGTAA 2022 0.5114 MVTRVCNPSGSIEVSEGVGLVALVGTLWISSSHKEGVPGVMVWVLCGVTVTGLQISDVEVYRAVESVSYGASKTMMAGVSGSSTTLFFISCLLFAFCIHASSQPLPPIVDGLSWNFYRSSCPKLEGIVTSHLQKVFKQDNGQAPALLRIFFHDCFGCDGSILLDGSPNEKDQPANIGIRPEALQTIENLRSLVHKECGRVVSCADLVVLAARDAVTLSGGPKFAVPLGRKDGLTFSINGTRNLPPPSFRTGQLLDAFAGRNLDTTDVVALSGAHTFGRAHCATFFSRINQTEPPIDPSLNNNLIKTCPSSQSPNTAVLDVRTPNVFDNKYYVNLANRQGLFASDQDLFGDARTKGIVNSFASNQRLFFEKFAVAVVKLSQLDKDIAQAAGLLRLHFHDCFVQGCDGSVLLDGSASGPSEKDAPPNFTLRPEAFKIIENLRGLLEKSCGRVVSCSDITALAARDAVFISGGPDYEIPLGRRDGLTFATRQVTLDNLPPPSSNTTTILSSLATKNLDPTDVVALSGGHTIGISHCSSFTNRLYPTQDPVMDKTFGKNLKLTCPTNTTDNTTVLDIRSPNTFDNKYYVDLMNRQGLFTSDQDLYTDKRTKGIVTDFAVNQSLFFQKFVFAMLKMGQLNVLTGTQGEIRANCSVRNANNKSFLTSVVEDVVETLIEM 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01154 673 Gene3D - 115 382 - -
Pumo3g01154 673 CDD secretory_peroxidase 375 650 IPR033905 GO:0004601|GO:0042744
Pumo3g01154 673 PRINTS Plant peroxidase signature 333 350 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo3g01154 673 PRINTS Plant peroxidase signature 265 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo3g01154 673 PRINTS Plant peroxidase signature 121 140 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo3g01154 673 PRINTS Plant peroxidase signature 145 165 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo3g01154 673 PRINTS Plant peroxidase signature 219 234 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo3g01154 673 PRINTS Plant peroxidase signature 317 332 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo3g01154 673 PRINTS Plant peroxidase signature 200 210 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo3g01154 673 FunFam Peroxidase 496 631 - -
Pumo3g01154 673 SUPERFAMILY Heme-dependent peroxidases 382 652 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pumo3g01154 673 Gene3D Peroxidase, domain 2 245 379 - -
Pumo3g01154 673 Gene3D Peroxidase, domain 2 497 632 - -
Pumo3g01154 673 SUPERFAMILY Heme-dependent peroxidases 106 382 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pumo3g01154 673 FunFam Peroxidase 369 508 - -
Pumo3g01154 673 FunFam Peroxidase 244 378 - -
Pumo3g01154 673 ProSitePatterns Peroxidases proximal heme-ligand signature. 518 528 IPR019793 -
Pumo3g01154 673 FunFam Peroxidase 115 252 - -
Pumo3g01154 673 ProSitePatterns Peroxidases active site signature. 143 154 IPR019794 GO:0004601
Pumo3g01154 673 PANTHER - 89 383 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo3g01154 673 Pfam Peroxidase 378 615 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo3g01154 673 Pfam Peroxidase 129 363 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo3g01154 673 ProSitePatterns Peroxidases active site signature. 388 399 IPR019794 GO:0004601
Pumo3g01154 673 ProSiteProfiles Plant heme peroxidase family profile. 111 378 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo3g01154 673 ProSiteProfiles Plant heme peroxidase family profile. 379 652 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo3g01154 673 PRINTS Haem peroxidase superfamily signature 219 231 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo3g01154 673 PRINTS Haem peroxidase superfamily signature 266 281 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo3g01154 673 PRINTS Haem peroxidase superfamily signature 319 334 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo3g01154 673 PRINTS Haem peroxidase superfamily signature 143 157 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo3g01154 673 PRINTS Haem peroxidase superfamily signature 201 218 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo3g01154 673 Gene3D - 384 649 - -
Pumo3g01154 673 CDD secretory_peroxidase 111 382 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01154 Pumo-Chr3 18701736 18719604 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01154 383 673 Peroxidase AT1G71695 64.605 4.09e-137 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01154 K00430 - gmx:100804126 542.732