Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01151 ATGGAACACGCCTTCCAAGCCATCCTGGCCGCCATCGGCAGCTTCTTCGTCGTGACACTCCTCCTCGCCGCCGCCATCCTCCTCTGCCAGCACCACCGCAACTCCTCCAAAACCCCAACCCGCAACTCTCAGATCCGAACCCAACCCGCTCCGCACCGGGACGCCTCCCTCTCCCTCGCCATGACGGACGCCATCTCCTTCGACCCCGACCTCATCAAGATCTCCTGGGAGGAGCTCGCGCGTGCCACCGACAACTTCTCCCCGCACCTCATCGTCGGCGACGGCAGCTTCGGCCTCGTCTACAAGGCCCGCCTCTCCACCGGCGCCCTCGTCGCCGTGAAAAAACTCTCCCCGGACGCCTTCCAAGGCTTCCGCGAGTTCACGGCGGAGATGGAAACCCTTAGCAAGCTCCGCCACCCCAACATCGTCAAAATCCTCGGGTACTGGGCCTCCGGCCCAGAACGCCTACTCGTCTACGAGTTCATCGAAAAGGGAAACCTCGACCAGTGGCTCCACGAGCCCGATCTCTCTCGCTCCCCCCTTTCCTGGTCAACGCGCGTCAACATCATCCGCGGCGTCGCCCATGGGCTCTCCTACCTCCACGGCCTCGACAAGCCCGTCATTCACCGCGACATCAAAGCCAGTAACATCTTATTGGACTCTAAGTTCCAGGCCCATATCGCTGACTTTGGGCTGGCCCGCAGGATCGACAAGACGCACTCCCACGTGTCCACGCAGTTCGCGGGGACCATCGGGTACATGCCGCCCGAGTATATACAAGGGTCCAATGTGGCTAACACGAAGGTGGATGTGTATAGTTTTGGGATTTTGATGATCGAGACCGCGTCCAGTCACCGCCCCAATTTGCCCATGAAATTGGGCCACGACGATATTGGGATGGTCCAGTGGGCCAGGAAGATGAAGGAGCAAAATGCGGAGATGGACATGGTTGATGTGAATATTTTAGGAGAAGGTTTGAGCGCGGAGAGTGTAAAGGAGTACGTGCGCATCGCTTGTGAGTGCACTGCTGAGTTGCAGAAGGAAAGACCCGAAATGCCCCAAGTTGTCCAATGGTTAGATTCAATGACACTTTGA 1095 0.5854 MEHAFQAILAAIGSFFVVTLLLAAAILLCQHHRNSSKTPTRNSQIRTQPAPHRDASLSLAMTDAISFDPDLIKISWEELARATDNFSPHLIVGDGSFGLVYKARLSTGALVAVKKLSPDAFQGFREFTAEMETLSKLRHPNIVKILGYWASGPERLLVYEFIEKGNLDQWLHEPDLSRSPLSWSTRVNIIRGVAHGLSYLHGLDKPVIHRDIKASNILLDSKFQAHIADFGLARRIDKTHSHVSTQFAGTIGYMPPEYIQGSNVANTKVDVYSFGILMIETASSHRPNLPMKLGHDDIGMVQWARKMKEQNAEMDMVDVNILGEGLSAESVKEYVRIACECTAELQKERPEMPQVVQWLDSMTL 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01151 364 SUPERFAMILY Protein kinase-like (PK-like) 69 359 IPR011009 -
Pumo3g01151 364 Gene3D Phosphorylase Kinase; domain 1 51 161 - -
Pumo3g01151 364 Gene3D Transferase(Phosphotransferase) domain 1 162 363 - -
Pumo3g01151 364 Pfam Protein kinase domain 91 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g01151 364 ProSitePatterns Serine/Threonine protein kinases active-site signature. 207 219 IPR008271 GO:0004672|GO:0006468
Pumo3g01151 364 CDD STKc_IRAK 92 362 - -
Pumo3g01151 364 ProSiteProfiles Protein kinase domain profile. 86 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g01151 364 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 8 361 - -
Pumo3g01151 364 FunFam Phytosulfokine receptor 2 162 363 - -
Pumo3g01151 364 SMART serkin_6 86 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g01151 364 ProSitePatterns Protein kinases ATP-binding region signature. 92 115 IPR017441 GO:0005524
Pumo3g01151 364 FunFam Phytosulfokine receptor 2 46 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01151 Pumo-Chr3 18681701 18682795 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01151 56 362 Receptor kinase-like Gene Family AT5G07280 44.805 1.58e-73 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Pumo3g01151 Pkinase 3.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01151 - - gmx:100802728 625.55