Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01136 ATGGCGTCGTCGAAGCTGATGGCGTCTTCGAATTCACGAAAATCAGAAACCTCCCCTTCCCCTTCCCTTCCCCCACCCCGCAATTCACCACCACCAACTTCATCCCCCATCCCCATCCCCGAACCCGCCGCACCCAAAACCGTCGACGACGTGTGGCGGGAGATCGTGGCCGGCAACCGCCGCGAGTGCAAGGAGGAGCTCCCCGACGACAACGAGATGATGACCCTCGAGGACTTCCTCGCCAAGGCCGAGGCTGTCGACGACGACGACGACGACAACGAGGAAATCAAGATGCCAATGCCCCTCACTGAGAGGCTCGGCAGCGGCAGCGGCACCGTCTTCTCCTTCGACCACCTTCCCACGACGCCGTTTCACGACGCCGCTGAAGGCTCCGTCATAGGCTTCGGAAACGGCGTGGAAGTGGTCGAAGGGGGAAGGGGAAAAAGACCGCGTCCCGTTTTGGAGCAGTTGGATAAGGCCGCGCAACAGAGACAGAGGAGAATGATCAAAAACAGAGAATCTGCTGCTAGGTCTAGGGAACGCAAGCAGGCTTACCAAGTGGAATTGGAGTCATTGGCGGTGAAACTAGAGGACGAAAATGACAAGCTCTTGAAGGAAAAGGCTGAGAGGAAAAAGGAGAGGTACAAGCAGCTAATGGAAAAAGTACTCCCTATTGCGCAGAAGCAAAGGCCACCATGTATACTCCGTAGGGCTCGCTCCTTGCAGTGGTAG 732 0.571 MASSKLMASSNSRKSETSPSPSLPPPRNSPPPTSSPIPIPEPAAPKTVDDVWREIVAGNRRECKEELPDDNEMMTLEDFLAKAEAVDDDDDDNEEIKMPMPLTERLGSGSGTVFSFDHLPTTPFHDAAEGSVIGFGNGVEVVEGGRGKRPRPVLEQLDKAAQQRQRRMIKNRESAARSRERKQAYQVELESLAVKLEDENDKLLKEKAERKKERYKQLMEKVLPIAQKQRPPCILRRARSLQW 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01136 243 CDD bZIP_plant_BZIP46 163 209 - -
Pumo3g01136 243 Pfam bZIP transcription factor 161 220 IPR004827 GO:0003700|GO:0006355
Pumo3g01136 243 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 161 222 - -
Pumo3g01136 243 MobiDBLite consensus disorder prediction 1 49 - -
Pumo3g01136 243 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 161 213 IPR004827 GO:0003700|GO:0006355
Pumo3g01136 243 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 37 218 IPR043452 GO:0003700|GO:0045893
Pumo3g01136 243 Coils Coil 182 221 - -
Pumo3g01136 243 MobiDBLite consensus disorder prediction 19 43 - -
Pumo3g01136 243 Gene3D - 161 212 - -
Pumo3g01136 243 SUPERFAMILY Leucine zipper domain 163 214 IPR046347 GO:0003700|GO:0006355
Pumo3g01136 243 MobiDBLite consensus disorder prediction 1 18 - -
Pumo3g01136 243 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 166 181 IPR004827 GO:0003700|GO:0006355
Pumo3g01136 243 SMART brlzneu 159 221 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01136 Pumo-Chr3 18203554 18206802 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01136 46 243 bZIP Transcription Factor Family AT5G44080 54.808 1.97e-64 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pumo3g01136 bZIP_1 9.1e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01136 K14432 - gmx:102659969 318.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g02367 6 46872030 46874835 Pumo3g01136 3 18203554 18206802 PCT