Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01123 ATGGAAGGGAATTTGCCACAGGGAGGTATAATTCAAGGTGGGACTTCTTTTGGTGGCTTTGATTTGCCGGGATCAATTCGGGTTCAGCATCAAGCACAGCATCCCCATACAATGCACCAACATCAAACTCATCCGCGTCAAGGGTCTTCTGTACATTCCGCGGTTCATGATGGTTTTCCACTTACAATGGGAACCATGCAGAACTGTGACCAAACCATTTCATTGACCGACTTTAGTAAAGGAGACAGAAGCAAAAACTCAGCAAGTGAGGAAGACGAGCCAAGCTTTACTGAAGATGGTGTTGATTGTCACCATGAAACGAGTAGAGGGAAGAAAGGATCACCTTGGCAGCGTGTGAAGTGGACTGATAAGATGGTAAGGCTTCTGATAACAGCTGTTTCTTATATAGGTGAGGATGTAACTGCTGATGGTGGTAGCAGCGGAAGAAGAAAGTTTGCAGTCTTACAGAAGAAGGGTAAATGGAAATCTGTTTCCAAGGTCATGGCTGAAAGGGGTTATCACGTTTCGCCTCAGCAATGCGAGGATAAATTCAATGACCTTAATAAAAGGTATAAAAAGCTTAATGATATGCTAGGGAGGGGCACTTCTTGTCAGGTTGTTGAAAATCCTGCGCTGTTGGATGTAATAGATTTTCTTTCCGAGAAAGAAAAGGATGATGTTCGGAAAATTTTAAGCTCAAAACACTTGTTCTATGAAGAGATGTGTTCTTATCATAACAGTAATAGGTTGCATTTACCCCATGATCCTGCATTGCAACGTTCACTGCAGTTAGCTCTCCGAAATAGAGATGATCATGATAATGATGATATCAGAAGGTCCCATCATGATGATCATGACGAAGATGATCAAGATGTGGAAATTGATGATCATGATGATTTTGAAGAGAATTGTGCTTCTCATGGTGATAGTAGAGGAATATATGGGCCATTAGGTGGATCTATGAAGAAACTGAAACATGGCCAAGGCCAAGAAGATGCTAATACTTTTGGTAATTCTTTAAATTGTCAGGACTACAACAAAAGTTCATATCCCCATGGACAGATGGTCCAATCTGATGTGAATCAAGGTTTACCTGAAGGCATGAGAGCAGCTTGGTTACAGAAGCAATGGGTTGAATCTCGCACGCTTCAGTTAGAAGAACAAAAGCTACAAATTCAGGTCGAGATGCTGGAACTAGAGAAACAGAGATTCAAGTGGCAGAGGTTTAGTAAGAAAAAGGACCGGGAATTGGAGAAGCTGAGTCTAGAAAATGAAAGAATGAAGCTTGAAAATGAACGTATTGCTTTAGAACTGAAGCGAAAGGAAATGGGCACTGGCTTTAAATAG 1347 0.4143 MEGNLPQGGIIQGGTSFGGFDLPGSIRVQHQAQHPHTMHQHQTHPRQGSSVHSAVHDGFPLTMGTMQNCDQTISLTDFSKGDRSKNSASEEDEPSFTEDGVDCHHETSRGKKGSPWQRVKWTDKMVRLLITAVSYIGEDVTADGGSSGRRKFAVLQKKGKWKSVSKVMAERGYHVSPQQCEDKFNDLNKRYKKLNDMLGRGTSCQVVENPALLDVIDFLSEKEKDDVRKILSSKHLFYEEMCSYHNSNRLHLPHDPALQRSLQLALRNRDDHDNDDIRRSHHDDHDEDDQDVEIDDHDDFEENCASHGDSRGIYGPLGGSMKKLKHGQGQEDANTFGNSLNCQDYNKSSYPHGQMVQSDVNQGLPEGMRAAWLQKQWVESRTLQLEEQKLQIQVEMLELEKQRFKWQRFSKKKDRELEKLSLENERMKLENERIALELKRKEMGTGFK 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01123 448 MobiDBLite consensus disorder prediction 83 115 - -
Pumo3g01123 448 MobiDBLite consensus disorder prediction 76 115 - -
Pumo3g01123 448 MobiDBLite consensus disorder prediction 1 63 - -
Pumo3g01123 448 Coils Coil 410 442 - -
Pumo3g01123 448 Coils Coil 380 402 - -
Pumo3g01123 448 PANTHER F16F4.11 PROTEIN-RELATED 1 445 - -
Pumo3g01123 448 MobiDBLite consensus disorder prediction 271 336 - -
Pumo3g01123 448 Gene3D - 121 193 - -
Pumo3g01123 448 MobiDBLite consensus disorder prediction 271 287 - -
Pumo3g01123 448 Pfam Myb/SANT-like DNA-binding domain 118 244 IPR044822 -
Pumo3g01123 448 MobiDBLite consensus disorder prediction 30 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01123 Pumo-Chr3 18018364 18025588 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pumo3g01123 Myb_DNA-bind_4 4.7e-24 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01123 - - gmx:100812134 810.061