Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01115 ATGATGGGTGTGGGGGCAGTGAAGCAAGACATCAAAGTGATGATCCTAACAGGGTTTGCAGGGCTAGTGGCTGGGGCATGCAGCATGGCCATTGGGGAGTTTGTGTCTGTGTACTCACAGTTGGACATAGAAGTTGCTCAAATGAAAAGGGACAAGGGAAGGGACAATGGGAGACAAGAGGAAGATGATGATGAGAAAGAGAAGTTACCAAACCCTATACATGCTGCAGCAGCATCAGCTTTGGCATTTTCAGTTGGTGCAATGGTGCCTCTCCTTGCAGCCTCTTTCATAAGGGACTATAAGGTGAGGCTTGGTGTGGTTTTGGGAGCAGTGAGCTTTGCTCTTGTGGTGTTTGGTTGGTTGGGGGCAGTGTTGGGTAAGGCTCCAACATTGAGGTCTTGTCTGAGGGTCTTGCTTGGGGGTTGGCTAGCCATGGCTGTTACTTTTGGGCTAACCAAGTTGATTGGGTCAAGTGGACTTTAG 483 0.4948 MMGVGAVKQDIKVMILTGFAGLVAGACSMAIGEFVSVYSQLDIEVAQMKRDKGRDNGRQEEDDDEKEKLPNPIHAAAASALAFSVGAMVPLLAASFIRDYKVRLGVVLGAVSFALVVFGWLGAVLGKAPTLRSCLRVLLGGWLAMAVTFGLTKLIGSSGL 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01115 160 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 1 155 IPR008217 GO:0005384|GO:0030026
Pumo3g01115 160 MobiDBLite consensus disorder prediction 49 69 - -
Pumo3g01115 160 Pfam VIT family 1 59 IPR008217 GO:0005384|GO:0030026
Pumo3g01115 160 Pfam VIT family 61 152 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01115 Pumo-Chr3 17950764 17951755 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01115 1 160 Nodulin-like Gene Family AT3G43660 69.375 1.14e-79 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01115 K22736 - gmx:100814343 281.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g02407 6 48455379 48457272 Pumo3g01115 3 17950764 17951755 PCT