Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01114 ATGGACTCTGAGCAGCTTGCTGAACTTGCTAGGGTTGATCCCAAGAGGGTTAAGAGGATTCTTGCCAATAGGCAATCTGCTGCTAAATCAAAGGAGAGGAGAGTGCAACATGAAAAAGATTTGACAGAAAGGGTCTCGCAGCTTGCGATTGAAGCAACTAACGTATCTACTAATGTTAGCATGCTTCAGAGAGACATTACAAAAAGGCAGGTTCGTATTAAGGAGCTCAGAATAACCAGAGAGGCTATGCGACAAGAAGCACGAATTAAAAATGCTCTCGATGCAGCGGTAAAGGAAGAAGTTCGAAGCCTTACGAATGAAACTGGTAATGTTGCTATTGTGTTGTGTTATCCTTCTCTCGAGGAGTTGGTCTCTCAATTCTCTTCCCAATTATCTCTACATCAGTTTCATAATCCTCCATCTCAGCAACAACATCTAGGCCCTCAGCAAACACAGCTCTCCATGCCTAATCCTCTTCCTCCCTCTACTCATCAGAGTTTTAGTGGGCATTATGGCCTTAGCTTCTCCAACTTCAATAACCAAAACTAG 549 0.4335 MDSEQLAELARVDPKRVKRILANRQSAAKSKERRVQHEKDLTERVSQLAIEATNVSTNVSMLQRDITKRQVRIKELRITREAMRQEARIKNALDAAVKEEVRSLTNETGNVAIVLCYPSLEELVSQFSSQLSLHQFHNPPSQQQHLGPQQTQLSMPNPLPPSTHQSFSGHYGLSFSNFNNQN 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01114 182 MobiDBLite consensus disorder prediction 136 166 - -
Pumo3g01114 182 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 13 76 IPR004827 GO:0003700|GO:0006355
Pumo3g01114 182 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 1 153 - -
Pumo3g01114 182 SMART brlzneu 11 75 IPR004827 GO:0003700|GO:0006355
Pumo3g01114 182 SUPERFAMILY Leucine zipper domain 15 66 IPR046347 GO:0003700|GO:0006355
Pumo3g01114 182 CDD bZIP_plant_RF2 16 65 IPR044759 GO:0003700|GO:0006355
Pumo3g01114 182 Pfam Basic region leucine zipper 13 62 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01114 Pumo-Chr3 17932031 17935854 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01114 1 143 bZIP Transcription Factor Family AT1G43700 41.096 6.53e-25 97.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pumo3g01114 bZIP_2 6.1e-06 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01114 K20557 - gmx:102664725 202.601