Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01082 ATGGATACTATACTAAGTAGTACATTGCTCCTCATGTTGGCATGCTCCATCATGCATGCTCTTCGTTCACTACACGCAAGGAGCAGAAAATCAAACTACAAGCTTCCACCAGGACCCTCTCTTCTCACCATCATCAGAAACTCCGTACAACTCTACAAGAAGCCACAGCAGACAATGGCCAAGCTTGCCAAAACCTACGGCCCCATAACGCGCTTCACCATAGGCCAATCAACCACCATAGTGATCTCCTCAATTGAAGCAACCAAAGAGATTCTCCAAACCCACGACTCACTATTCTCGGACAGAACAAACCCCGACATCACAACCTCGTACAACCACAACCGTTACAGCCTGGTCTTTCTCCCGGTCTCGCCCCTCTGGCAGGAGCTGAGGAAAATCTGCCACGGAAACTTGTTCTCCGCCAAGACCCTCGACGCGAGCACAGTCCTCAGGCGCAAGAAAATGCAGGAACTCCTCGCCGATATCCGCCAATGGAGCCTCAACGGCGAAGTGGTGGATATCGGAAGAGCAGCGTTCATGGCCTGCATTAACTTTTTATCGTACACGTTTCTGTCTCTGGATTTTGTTCCCTCTGTAGGTGATGGCGAGTACAAGCACATAGTGGGGACTCTCTTGAAGGCAACTGGGACACCCAACTTGGTGGATTACTTTCCCGTGCTGAGGGTGTTTGATCCACAGGGGATTAGGAGGCACACCACCAATTACATTGACAAGCTGTTCGATGTGTTTGACCCCTTGATTGATGAACGCATGAGGAAGAGGCAAGAGAAGGGTTATGTCACTAACCATGACATGTTGGATATCTTGCTGGATATCTCTGACCAGAGTAGCGAGAGGATTCATAGAAAGCAGATCAAGCATTTGTTCCTTGATCTATTCGTTGCGGGGACGGATACAACGGCCTACGGTTTAGAAAGAACAATGACGGAACTAATGCACAACCCGGAGGCCATGTTAAAAGCCAAGAAGGAGTTAGCAGAAGTCATCGGAGTAGGAAACCCCGTTGAGGAATCCGACGTGGCAAGGCTCCCGTACCTACAAGCAGTGATAAAAGAGAGTCTTCGCATGCACCCACCGGCTCCACTGTTGCTGCCACGTAGGTCCAAAACAGACGTGGAAGTGTGCGGGTACACGATCCCACAGGGGACCCAAGTGCTCATCAACGAGTGGGCCATAGGGAGGAACCCAGACATATGGGAGGACGCGCATGTGTTCTCGCCAGAAAGATTCTTGGACTCTGACATCGACGTGAAGGGTCGCCACTTCAAGCTCACCCCGTTCGGGAGTGGGAGGCGCATCTGCCCTGGCTCTCCACTCGCTGTGAGGATGCTGCACAACATGATGGGGTCATTGATCAACGCCTTTGACTGGAAACTCGAGAACAACATGGACCCTAAGGACATGGACTTGGATCAGTCCCTCAGAGCTATCCCTGTTATCATAAACGCCAACTGA 1476 0.5102 MDTILSSTLLLMLACSIMHALRSLHARSRKSNYKLPPGPSLLTIIRNSVQLYKKPQQTMAKLAKTYGPITRFTIGQSTTIVISSIEATKEILQTHDSLFSDRTNPDITTSYNHNRYSLVFLPVSPLWQELRKICHGNLFSAKTLDASTVLRRKKMQELLADIRQWSLNGEVVDIGRAAFMACINFLSYTFLSLDFVPSVGDGEYKHIVGTLLKATGTPNLVDYFPVLRVFDPQGIRRHTTNYIDKLFDVFDPLIDERMRKRQEKGYVTNHDMLDILLDISDQSSERIHRKQIKHLFLDLFVAGTDTTAYGLERTMTELMHNPEAMLKAKKELAEVIGVGNPVEESDVARLPYLQAVIKESLRMHPPAPLLLPRRSKTDVEVCGYTIPQGTQVLINEWAIGRNPDIWEDAHVFSPERFLDSDIDVKGRHFKLTPFGSGRRICPGSPLAVRMLHNMMGSLINAFDWKLENNMDPKDMDLDQSLRAIPVIINAN 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01082 491 FunFam Cytochrome P450 76C4 27 488 - -
Pumo3g01082 491 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g01082 491 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g01082 491 PRINTS P450 superfamily signature 441 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g01082 491 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g01082 491 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506|GO:0016705
Pumo3g01082 491 Gene3D Cytochrome P450 21 484 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g01082 491 Pfam Cytochrome P450 36 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g01082 491 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g01082 491 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g01082 491 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g01082 491 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g01082 491 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g01082 491 PRINTS E-class P450 group I signature 354 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g01082 491 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g01082 491 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g01082 491 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 9 480 - -
Pumo3g01082 491 SUPERFAMILY Cytochrome P450 29 475 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g01082 491 CDD CYP76-like 63 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01082 Pumo-Chr3 17227980 17230670 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01082 4 486 Cytochrome P450 AT2G45550 42.346 1.08e-138 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01082 - - gmx:100789835 914.064