Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01070 ATGGCGGGTTTTTGGAGTGTGTTTTGTGGGGAATCTGGTTGTTCAGAGGCTGGAAGAATGCCTTGCAGTCATGATTTTAGGCTTCTCATTGATCCTTCCGCTTGTGTCAACCATTTGTTGATCTCTTGCTTTGACGTACTGCTTCTTATCATGCTTGTATTCATTATGATCCAGAAGTCAACATTAAAACCATCTCGGGGTCTAATACAGGTGCAAAGATATTCATATTTTCAGCTAGTTTCTGCCATAGCCAATGGTACTCTGGGATTGGCACTTTTGTGCTTTGGCATTTGGGTTTTAGGGGAAAGGTTGAGGAAAGCCCAAACTGCGTCGCCTCTTAATTGGTGGTTGCTCGAAATCTTTCATGGATTGACATGGTTGTTAGTGAGTTTGACAATTAGTCTTAAGTTGAAACATCTTCCAAGAGCATGGTCAAGGCTATTTGCTAGTCTAATATTCTTGGTTTCTGGTTTTTTCTGTGCTTCATCATTGTTTTATGCAATTAGTAGCAGACAACTATCCCTTAAGATAGCTTCAGATATTCTATTTTTTCTGGGGGCGATATTATTGTTATCATGCACATATAAGGAATCCAAGCATAGGGACACAGACAGAGAAATTGATGAAAGTCTTTATGCCCCCTTAAACGGTGAGTCCAACAAAAATGATTCTATCAGATATGTAACCCCATTTGCAAAAATTGGATTCTTCGGCAGAATGTCATTTTGGTGGTGGAATTCATTGATAAAAATGGGAAAAGAGAAAACACTTCAGGATGAAGACATTCCGAGGTTGCGGGAGGAGGATCGAGCAGAAAGTTGTTATTTGCTGTTTCTAGATCAATTGAACAGACAGAAACAGAAGGACCAATCCTCGCAGCCATCAGTTTTGAGGACAATAATTTTATGCCATTGGAAAGAAATTTTAATATCAGAATTGTTTGCATTGCTTAAGTTAGTTGCCCTGTCTTCAGGACCTCTTCTTATGAATTCTTTTATATTGGTGGCTGAGGGTAACGAGAGTTTCAAATATGATGGTTTTCTGTTAGCCATATCACTTTTCTTTACAAAATTTATAGAATCCCTGTCACAAAGGCAATGGATCTTCCGCTGTAGACTTATTGGTCTAAAGGTTAGGTCGTTTCTAACTGCAGCCATTTATAGAAAGCAATTGAGGTTATCCAATTCTGCTAGATTGATGCACTGTGGTGGTCAGATAATGAATTATGTGACTGTGGATGCTTATAGAATTGGTGAATTTCCCTATTGGTTTCACCAGACTTGGACAACTTGCTTACAGCTATGTATCTCCTTATTTATACTATTTCGTGCTGTTGGATTGGCAACAATTGCCTCCTTGGTGGTGATAGTAATCACTGTGCTTTGCAATACTCCACTTGCAAAGTTACAGCACAAGTTTCAAAGCAAACTTATGGTGACACAAGATCAAAGATTGAAGGCTTGTTCTGAGGCTCTTGTGAATATGAAGGTGTTGAAGTTGTATGCATGGGAAACCAATTTTAAAAGTGCTATAGAGAGATTAAGGAACGAGGAGCTCAAATGGTTGTCTTCAGTGCAATTAAGAAAGGCATACAACACCTTTCTCATGTGGTCTTCACCTGTTTTGGTCTCTGCTGCTTCCTTTGGGGCATGTTACTTTCTTAATGTTCCTTTACACGCAAATAATGTTTTCACTTTTGTCGCAACTTTGCACCTTGTTCAAATTCCAATTAGAACCATCCCTGACGTTATTGGGGTGGTCATCCAGGCAAAAGTTGCATTTACTCGGATTGTAAAATTCCTGGAGTCACCAGAACTGCAGAGTGCAAATATCTCACAAAGGTGTCTCAATGAGAATAAGAGGGGTTCAATTTCAATCAAGTCTGCTGACTTTTCATGGGAAGATAATGTGTCAAAGCCAACACTGAGAAACATAAATTTGGAGGTTAGACCAGGGCAAAAGGTGGCTATCTGTGGAGAGGTTGGTTCAGGAAAATCAACTCTCTTAGCAGAATTCTCAGAGAAGTTCTTAATACTCGGGACAATTGAAGTTTATGGGAAGTTTGCCTATGTTTCTCAAACAGCATGGATACAGACAGATGGCTTTTCAACTGGACAGGAATACATAATGGAAGGAGTCGCTGGGAAAACAGTCTTGCTCGTGACTCATCAAGTTGACTTCCTTCCATCATTTGATTCTGTTTTGTTAATGTCAGATGGGGAAATCATAGAAGCTGCTCCTTATCACCATTTGTTGAGCTCAAGCCAAGAATTTCAGGACCTTGTGAATGCCCACAAAGAGACTGCTGGTTCTGACCGGCATGTGGATGTTACTTCTTCGCAGAAACATTCAAATAGTGCTAGAGAAATCAGAAAAATATCTACCGAGCAGCATTATGAAGCATCAAAAGGTAATCAATTACTTAAGCAAGAAGAGAGAGAAAAAGGAGACCGAGGGTTCAAACCGTATATACAGTATCTGAATCAGAGCAAAGGATATATATACTTCTCTGTGGCTGCTCTTTCTCACCTACTATTTGTGGTTGGCCAAATATTACAAAACTCATGGATGGCCGCTAGTGTTGACAATCCTCAAGTCAGCACATTTCAATTGATTCTTGTTTACTTGTTGATTGGAGTTATTTCAACAGTATTTTTGTTGATGAGAAGTCTTTTTGCAGTTGCTTCAGGCTTTGAATCATCAAAGTCTGTATTTTTACAGCTACTGAACTCCCTTTTTCATGCCCCCATGTCATTTTATGACTCCACTCCTTTAGGACGGATACTTAGTAGGGTCTCCTCAGATCTCAGCAATGTGGAGCTTGATGTCACAGTCGGCCTTATGGTTGCTGTGGGAGCGACTATGAATTGCTATTCTAATCTAACCGTTTTAGCTGTTGTTACTTGGCAAGTCTTGTTTGTCTCCATACCAATGATTTATTTTGCAATCCGCCTGCAGAGATATTACTTTGCCTCTGCAAAAGAACTGATGAGGATGAATGGCACAACAAAATCCTTTGTTGCTAACCATCTTGCTGAATCTGTTGCTGGAGCTGTGACAATAAGGGCTTTTGAGGAGGAAGATCGTTTTTGTGAGAAAAATCTTGATCTAATTGACGTCAATGCGAGTCCTTACTTCCATAGTTTTACAGCGAATGTGTGGTTGATTCAACGATTAGAAACAGGGAGTGCTGTTGTTCTTGCATCTGCGGCACTGTGCATGGTTGTACTTCCACGTGGAACTTTCTCCTCTGGATTTATTGGCATGGCTCTCTCCTATGGCCTTTCACTTAACATCTCCTTAGTAAATTCAATTCAAAATCAATGCAGCATAGCGAATTATATAATATCAGTGGAGAGGCTAAATCAGTATATGCATATGCCAAGTGAGGCTCCAGAAGTAATAGAAGGAAATCGTCCTCCTGTGAATTGGCCAGTTGCTGGTAGAGTACAAATAAATGAATTGCAGATACGTTACAGGCCTGATGCACCACTAGTACTTCGTGGAATCACATGCACGTTTGAAGGAGGGCACAAAATTGGTATTGTTGGCCGCACAGGCAGTGGGAAGTCCACTCTTATAGGTGCTTTATTCCGTCTAGTGGAGCCAGCAGCTGGAAAAATCATTGTTGATGACATTGACATTTGTTCCATTGGCCTCCATGATTTGAGGTCGCGTTTTGGTATTATACCTCAGGATCCTACTCTTTTTAATGGGACAGTCAGATACAATTTGGACCCCTTATCTCAACACTCTGATCAAGAGATATGGGAGGTTCTAGGGAAGTGTCAGTTGCAAGAGGCTGTCCAGGAGAAAAAAGAGCGATTAGACTCTTCAGTTGTTGAAGCTGGAGCAAACTGGAGCATGGGACAACGGCAGCTATTCTGCTTGGAGCGTGCTCTTCTCAGGAGAAGTCGGATATTGGTGCTTGATGAAGCAACTACGTCAATTGAAAATGCAACTGATTTGATTTTGCAGAAAACCATTAGGACCGAGTTTGCAGATTGTACAGTGATCACAGTAGCTCACAGGATACCAACTGTGATGGATTGCACCAAGGTTCTTGCCATCAGTGATGGGAAACTGGTGGAGTATGATGAGCCAATGAAGTTGATAAAGAGAGAAGGATCGCTGTTTGGGAAGCTTGTGAACGAACACTGGTCTCATTTTCAGTCTGCAGAATCTCGTTGA 4191 0.408 MAGFWSVFCGESGCSEAGRMPCSHDFRLLIDPSACVNHLLISCFDVLLLIMLVFIMIQKSTLKPSRGLIQVQRYSYFQLVSAIANGTLGLALLCFGIWVLGERLRKAQTASPLNWWLLEIFHGLTWLLVSLTISLKLKHLPRAWSRLFASLIFLVSGFFCASSLFYAISSRQLSLKIASDILFFLGAILLLSCTYKESKHRDTDREIDESLYAPLNGESNKNDSIRYVTPFAKIGFFGRMSFWWWNSLIKMGKEKTLQDEDIPRLREEDRAESCYLLFLDQLNRQKQKDQSSQPSVLRTIILCHWKEILISELFALLKLVALSSGPLLMNSFILVAEGNESFKYDGFLLAISLFFTKFIESLSQRQWIFRCRLIGLKVRSFLTAAIYRKQLRLSNSARLMHCGGQIMNYVTVDAYRIGEFPYWFHQTWTTCLQLCISLFILFRAVGLATIASLVVIVITVLCNTPLAKLQHKFQSKLMVTQDQRLKACSEALVNMKVLKLYAWETNFKSAIERLRNEELKWLSSVQLRKAYNTFLMWSSPVLVSAASFGACYFLNVPLHANNVFTFVATLHLVQIPIRTIPDVIGVVIQAKVAFTRIVKFLESPELQSANISQRCLNENKRGSISIKSADFSWEDNVSKPTLRNINLEVRPGQKVAICGEVGSGKSTLLAEFSEKFLILGTIEVYGKFAYVSQTAWIQTDGFSTGQEYIMEGVAGKTVLLVTHQVDFLPSFDSVLLMSDGEIIEAAPYHHLLSSSQEFQDLVNAHKETAGSDRHVDVTSSQKHSNSAREIRKISTEQHYEASKGNQLLKQEEREKGDRGFKPYIQYLNQSKGYIYFSVAALSHLLFVVGQILQNSWMAASVDNPQVSTFQLILVYLLIGVISTVFLLMRSLFAVASGFESSKSVFLQLLNSLFHAPMSFYDSTPLGRILSRVSSDLSNVELDVTVGLMVAVGATMNCYSNLTVLAVVTWQVLFVSIPMIYFAIRLQRYYFASAKELMRMNGTTKSFVANHLAESVAGAVTIRAFEEEDRFCEKNLDLIDVNASPYFHSFTANVWLIQRLETGSAVVLASAALCMVVLPRGTFSSGFIGMALSYGLSLNISLVNSIQNQCSIANYIISVERLNQYMHMPSEAPEVIEGNRPPVNWPVAGRVQINELQIRYRPDAPLVLRGITCTFEGGHKIGIVGRTGSGKSTLIGALFRLVEPAAGKIIVDDIDICSIGLHDLRSRFGIIPQDPTLFNGTVRYNLDPLSQHSDQEIWEVLGKCQLQEAVQEKKERLDSSVVEAGANWSMGQRQLFCLERALLRRSRILVLDEATTSIENATDLILQKTIRTEFADCTVITVAHRIPTVMDCTKVLAISDGKLVEYDEPMKLIKREGSLFGKLVNEHWSHFQSAESR 1396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01070 1396 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1140 1377 IPR027417 -
Pumo3g01070 1396 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 570 754 IPR027417 -
Pumo3g01070 1396 SUPERFAMILY ABC transporter transmembrane region 828 1130 IPR036640 GO:0005524|GO:0016020
Pumo3g01070 1396 FunFam ABC transporter C family member 10 292 605 - -
Pumo3g01070 1396 CDD ABC_6TM_ABCC_D2 832 1125 IPR044726 GO:0140359
Pumo3g01070 1396 Gene3D ABC transporter type 1, transmembrane domain 798 1131 IPR036640 GO:0005524|GO:0016020
Pumo3g01070 1396 Gene3D ABC transporter type 1, transmembrane domain 280 606 IPR036640 GO:0005524|GO:0016020
Pumo3g01070 1396 Gene3D - 708 789 IPR027417 -
Pumo3g01070 1396 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 712 1386 - -
Pumo3g01070 1396 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1150 1384 IPR003439 GO:0005524
Pumo3g01070 1396 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 846 1113 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pumo3g01070 1396 Gene3D - 1134 1385 IPR027417 -
Pumo3g01070 1396 Pfam ABC transporter transmembrane region 834 1088 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pumo3g01070 1396 Pfam ABC transporter transmembrane region 309 571 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pumo3g01070 1396 SMART AAA_5 651 762 IPR003593 GO:0016887
Pumo3g01070 1396 SMART AAA_5 1176 1368 IPR003593 GO:0016887
Pumo3g01070 1396 Pfam ABC transporter 642 676 IPR003439 GO:0005524
Pumo3g01070 1396 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 313 589 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pumo3g01070 1396 FunFam ABC transporter C family member 3 1133 1385 - -
Pumo3g01070 1396 Pfam ABC transporter 1167 1314 IPR003439 GO:0005524
Pumo3g01070 1396 CDD ABCC_MRP_domain2 1148 1368 - -
Pumo3g01070 1396 Gene3D - 618 707 IPR027417 -
Pumo3g01070 1396 SUPERFAMILY ABC transporter transmembrane region 297 602 IPR036640 GO:0005524|GO:0016020
Pumo3g01070 1396 CDD ABC_6TM_ABCC_D1 313 597 IPR044746 GO:0140359
Pumo3g01070 1396 FunFam ABC transporter C family member 5 799 1131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01070 Pumo-Chr3 16731882 16743089 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01070 1146 1395 Calmodulin-binding Proteins AT2G36910 27.953 8.27e-26 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01070 K05666 - egt:105971630 1719.13